Streptomyces atratus: C5746_24885
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Entry
C5746_24885 CDS
T07374
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
sata
Streptomyces atratus
Pathway
sata03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sata00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
C5746_24885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sata03021
]
C5746_24885
03400 DNA repair and recombination proteins [BR:
sata03400
]
C5746_24885
Enzymes [BR:
sata01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
C5746_24885
Transcription machinery [BR:
sata03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
C5746_24885
DNA repair and recombination proteins [BR:
sata03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
C5746_24885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
AXE79614
UniProt:
A0A2Z5JHB6
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All DBs
Position
5391755..5392777
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AA seq
340 aa
AA seq
DB search
MLIAQRPSLTEEVVDEFRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDLILNIKQLVVSSEHDEPVVMYLRKQGPGLVTAADIAPPAGVEVHN
PDLVLATLNGKGKLEMELTVERGRGYVSAVQNKQVGQEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLIVDVETKQAMRPRDAMASAGKTLVELFGLARELNIDAEGIDMGPSPTD
AALAADLALPIEELELTVRSYNCLKREGIHSVGELVARSEADLLDIRNFGAKSIDEVKAK
LAGMGLALKDSPPGFDPTAAADAFGADDDADAGFVETEQY
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgcttatcgctcagcgtccgtcgctgaccgaagaggtcgttgacgagttccgctcccgg
ttcgtcatcgagccgctggagccgggcttcggctacaccctcggcaactctcttcgccgt
acgctcctctcctcgatccccggcgctgctgtcaccagcatccggatcgacggtgtcctg
cacgagttcaccaccgtgccgggcgtcaaggaggacgtcaccgacctcatcctcaacatc
aagcagctggtcgtctcctcggagcacgacgagccggtcgtgatgtacctgcgcaagcag
ggtcccggcctggtcaccgctgctgacatcgccccgccagccggtgtcgaggtccacaac
ccggacctcgtcctggccacgctgaacggcaagggcaagctggagatggagctgaccgtc
gagcgcggtcgcggctacgtctccgccgtccagaacaagcaggtgggccaggagatcggc
cgtatcccggtcgactccatctactcgccggtgctcaaggtcacgtacaaggtcgaggcg
acccgtgtcgagcagcgcaccgacttcgacaagctgatcgtcgacgtcgagaccaagcag
gccatgcgtccccgtgacgccatggcttcggccggtaagaccctggtcgagctgttcggt
ctggcgcgcgagctcaacatcgacgccgagggcatcgacatgggcccgtccccgacggac
gccgcgctcgctgccgatctggcgctgccgatcgaggagctcgagctcacggtccgttcg
tacaactgcctcaagcgcgagggcatccactccgtgggtgagctcgtggctcgttccgag
gccgacctgctcgacatccgcaacttcggtgcgaagtcgatcgacgaggtcaaggcgaag
ctggccggtatgggcctggcgctcaaggacagcccgcccggattcgacccgacggccgcg
gccgacgcgttcggcgcggatgacgacgcggacgccggtttcgtggagaccgagcagtac
tga
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