Streptomyces atratus: C5746_29955
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Entry
C5746_29955 CDS
T07374
Name
(GenBank) RNA polymerase sigma factor WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
sata
Streptomyces atratus
Pathway
sata02020
Two-component system
sata02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sata00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
C5746_29955
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
C5746_29955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sata03021
]
C5746_29955
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
sata02035
]
C5746_29955
Transcription machinery [BR:
sata03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
C5746_29955
Bacterial motility proteins [BR:
sata02035
]
Flagellar system
Flagellar assembly proteins
Stator
C5746_29955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
Sigma70_ECF
HTH_23
UPF0122
HTH_31
Motif
Other DBs
NCBI-ProteinID:
AXE80490
UniProt:
A0A2Z5JJG2
LinkDB
All DBs
Position
6535962..6536798
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AA seq
278 aa
AA seq
DB search
MPQHTSGSDRAAVPPAARGTVRPPAPSSLDELWRSYKSTGDERLREQLILHYSPLVKYVA
GRVSVGLPSNVEQADFVSSGVFGLIDAIEKFDIERAIKFETYAITRIRGAMIDELRALDW
IPRSVRQKARAVERAYATLEAQLRRTPSEPEVAAEMGIALEELHAVFSQLSLANVVALEE
LLHVGGEGGDRLSLMDTLEDTAADNPVEVAEDRELRRLLARAINTLPEREKTVVTLYYYE
GLTLAEIGNVLGVTESRVSQIHTKSVLQLRAKLADAGR
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgccccagcacacctccgggtctgaccgcgcggcagtaccaccggctgcgcgtggcact
gtgcgcccccctgccccctcctcgctcgacgagttgtggcgttcgtacaagtccacgggc
gacgagcggctgcgggagcagctgatcctgcactactccccgttggtgaagtacgtcgcg
ggccgggtgagtgtgggcctgccttccaatgtcgagcaggcggatttcgtctcctcaggg
gtgttcggactgatcgacgcgatcgagaagttcgacatcgagcgcgcgatcaagttcgag
acgtacgcgatcacccgcatccgtggcgcgatgatcgacgaactccgcgcgctggactgg
attccacgttcggtgcgccagaaggcacgggccgtggaacgcgcctatgccacgctggag
gcacagctgcgacgcaccccttccgagccggaggtcgctgcggagatgggcatcgcactg
gaggaactgcacgcggttttcagccagttgtcgctggcgaacgtggtcgccttggaggaa
ctgctgcacgtcggcggcgagggtggtgaccggctgagcctgatggacacgctggaggac
accgccgccgacaatccggtggaagtcgccgaggaccgtgagctcagacggctgctcgcc
cgggcgatcaatacgcttccggagcgcgagaagacggtcgtcacgctgtactactacgag
ggcctcaccctcgccgagatcggcaatgtgctcggggtgaccgagagccgtgtgagtcag
atccacaccaagtcggtgctgcaactgcgtgcgaaactggccgacgccggacgctga
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