Sinomonas atrocyanea: SA2016_0598
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Entry
SA2016_0598 CDS
T04286
Name
(GenBank) DNA glycosylase
KO
K05522
endonuclease VIII [EC:3.2.2.-
4.2.99.18
]
Organism
satk
Sinomonas atrocyanea
Pathway
satk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
satk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SA2016_0598
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
satk03400
]
SA2016_0598
Enzymes [BR:
satk01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SA2016_0598
DNA repair and recombination proteins [BR:
satk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SA2016_0598
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
Motif
Other DBs
NCBI-ProteinID:
AMM31291
UniProt:
A0A126ZXK1
LinkDB
All DBs
Position
complement(615618..616472)
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AA seq
284 aa
AA seq
DB search
MPEGDNVYQAARRMNAALAGKRLAASDFRVPAFATLDLSGWTVLEVVSRGKHLLHRLAPP
GPDGAAAPGPEGRLSIHSHLSMEGSWQVYAPGERWRKPAHTARAALTTEDGTSAVGFSLG
MLEVIATAEEGDAVGHLGPDLLGPDWDPARAEANLRAQPDRAVGLALLDQRNLAGVGNIY
RCELCFLARVHPATPVGDVPDLAGMVATAKRLLEANKARSRNTVGGFGPRNGTWVYGRTG
QPCLRCRTRVRHGTLAEPVPGTGTRLGDTRERDIYYCPSCQPLR
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagggtgacaacgtctaccaggcggcgcgaaggatgaacgcggccctcgccggc
aaacgccttgccgcgagcgacttccgggtgcccgcgttcgcgaccctggacctctcgggc
tggaccgtcctcgaggtcgtctcccgtggcaagcacctcctccaccggctcgccccgccc
gggccggacggcgccgccgctcccggcccggaagggcgcctgagcatccactcccacctc
tcgatggagggcagctggcaggtctatgcccccggcgagcggtggcggaagcccgcgcac
acggcccgcgcggccctgaccacggaggacggtacgagcgccgtgggcttctcgctcggg
atgctcgaggtgatcgcgaccgccgaggagggcgacgcggtcgggcacctcgggcccgat
ctgctgggcccggactgggacccggcccgggcggaggcgaacctgcgcgcccagccggac
cgcgccgtcggcctcgcactcctcgaccagcgcaacctcgccggggtcggcaacatctac
cggtgcgagctgtgcttcctcgcccgcgtgcacccggccaccccggtcggcgacgtcccg
gacctcgcggggatggtcgcgacggccaagcgcctgctcgaggcgaacaaggcgcggtcc
cggaacaccgtgggcgggttcgggccgcgcaacggcacctgggtgtacgggcgcaccggt
cagccgtgcctgcgctgcaggacccgcgtccggcacggcacgctcgccgagccggtcccc
ggcaccgggacgcgcctcggggacacccgcgagcgcgacatctactactgccccagctgc
cagccgctgcgctga
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integrated database retrieval system
