Sinomonas atrocyanea: SA2016_0683
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Entry
SA2016_0683 CDS
T04286
Name
(GenBank) Eukaryotic DNA topoisomerase I, catalytic core
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
satk
Sinomonas atrocyanea
Brite
KEGG Orthology (KO) [BR:
satk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
satk03032
]
SA2016_0683
03400 DNA repair and recombination proteins [BR:
satk03400
]
SA2016_0683
Enzymes [BR:
satk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SA2016_0683
DNA replication proteins [BR:
satk03032
]
Prokaryotic type
DNA Topoisomerases
SA2016_0683
DNA repair and recombination proteins [BR:
satk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SA2016_0683
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AMM31373
UniProt:
A0A126ZWA1
LinkDB
All DBs
Position
710222..711205
Genome browser
AA seq
327 aa
AA seq
DB search
MKTRSRRTAHGTITRRRAGKGFSYRDADGQRVDSPEVLARIEALAIPPAWRNVRIAASQR
ARVQATGIDAAGRKQYLYHSTWRERQEARKFDRAVALARRLPAIRRAVTEDLRGKHGPKE
QALAAALRIVDRLGVRVGNRRYARQHGSFGVTTIQRRHLRLDGETISLEFPGKSGMQWSV
ELRDPDLAEYLRSLPKGPKSRAALGYESATGFQRIGSESLNGYLRVRAGMGASAKDLRTW
RGTVIAAESLARSAEQGFDAEEAWRRAIADAADWLHNTIAVARGSYVDPRLLLAYHEGRK
LTTPGGKVSDAALAELLDSTPRTGPGT
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgcgcagcaggcggacggcgcacgggacgatcacccggcgccgcgcgggcaag
gggttcagctaccgggacgcggacggccagcgggtcgactcgccggaggtcctcgcgcgg
atcgaggcgctcgccataccgccggcctggcggaacgtgcgcatcgcggcgtcgcagcga
gccagggtccaggcgaccggcatcgacgccgccggccggaagcagtacctgtaccacagc
acgtggcgcgagcggcaggaggcccgcaagttcgaccgcgccgtggccctggcccgcagg
cttcccgcgatccgccgcgcggtcacggaagacctccgcggcaagcacggccccaaggaa
caggccctcgcggcggcgctgcgcatcgtggaccggctcggagtgcgggtgggaaaccgc
aggtacgcccgccagcacggctccttcggcgtcaccaccatccagcgcaggcacctgcgc
ctcgacggcgaaacgatctcgctggagttcccgggcaagtccgggatgcagtggtcggtg
gaactgcgcgatcccgatctggccgagtacctccgcagcctgccgaagggcccgaagtcc
cgggccgccctgggctacgagtccgcgacggggttccagcgcatcggatccgagtccctc
aacgggtacctgcgcgtacgggccggcatgggcgcgagcgccaaggacctgcgcacgtgg
cgcggcaccgtgatcgcggcggaatccctcgcccgcagtgcggagcagggcttcgacgcc
gaggaggcgtggcggcgcgccatcgcggacgctgcggactggctccacaacaccattgcg
gtggcccgcggatcctacgtggacccacggcttctcctcgcctaccacgagggccggaaa
ctcacgacgcccggcggcaaggtctccgacgcggcgctcgccgagctgctcgactcgacg
ccgcgcaccgggccgggcacctag
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