Sinomonas atrocyanea: SA2016_1662
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Entry
SA2016_1662 CDS
T04286
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
satk
Sinomonas atrocyanea
Pathway
satk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
satk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SA2016_1662
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
satk03019
]
SA2016_1662
03016 Transfer RNA biogenesis [BR:
satk03016
]
SA2016_1662
Enzymes [BR:
satk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
SA2016_1662
Messenger RNA biogenesis [BR:
satk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SA2016_1662
Transfer RNA biogenesis [BR:
satk03016
]
Prokaryotic type
tRNA degradation factors
SA2016_1662
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
PCB_OB
S1_RRP5
aRib
KH_KhpA-B
KH_2
Motif
Other DBs
NCBI-ProteinID:
AMM32338
UniProt:
A0A126ZYS3
LinkDB
All DBs
Position
1782636..1784876
Genome browser
AA seq
746 aa
AA seq
DB search
MEGPEIQFSEAVIDNGRYGQRVVRFETGRLAKQAAGAAMAYIDDDTALLSATTAGKSPRE
GFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILACRLMDRPLRPAFVKGLRNEVQ
VVVTVLAINPDELYDVVAINAASMSTQLAGLPFSGPIGGVRVALVHDEQGAQWVAFPKHS
QLQKATFDMVVAGRIAGDDVAIMMVEAEATDHSWSLIKDEGATAPTEEVVAEGLEAAKPF
IRALCEAQQDLADRAAKPTAEFPVFLDYEADAYDAVEAAAAGKLAEVFQIADKQEREAAS
DALKAEVLAQLAGQFEGREKELSAAFRSVTKKVVRQRILTEQVRIDGRGLTDIRQLTAEV
EVLPRVHGSAIFERGETQIMGVTTLNMLKMEQQIDSLSPETHKRYMHNYNFPPYSTGETG
RVGSPKRREIGHGALAERALVPVLPSREEFPYAIRQVSEALGSNGSTSMGSVCASTLSLL
NAGVPLKAPVAGIAMGLVSDEVDGQTRYAALTDILGAEDAFGDMDFKVAGTSEFVTAIQL
DTKLDGIPASVLAAALKQAREARLHILSVINAAIDRPDELSEFAPRIIAIKIPVDKIGEV
IGPKGKMINQIQEDTGAEISIEDDGTVLIGATDGSSAEAARAAVNAIANPQLPEVGERYL
GTVVKTTTFGAFVSLTPGKDGLLHISELRKLAGGKRVDNVEDVVSVGQKVQVEITKIDDR
GKLSLAPVVAEADAAAEGEASAEVEA
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atggagggtcccgagatccagttctctgaggccgtcatcgacaacggccgctacggccag
cgcgtcgtccgcttcgagaccggccgcctcgccaagcaggccgccggcgcggcgatggcc
tacatcgacgatgacacggccctgctctccgccaccacggcgggcaagtccccgcgtgag
ggcttcgacttcttcccgcttaccgtggacgtcgaggagcgcatgtacgccgcgggccgc
atccccggctcgttcttccgccgcgagggccgtccctcgacggacgccatcctcgcgtgc
cgcctcatggaccgcccgctgcgcccggccttcgtcaagggcctgcgcaacgaggtccag
gtcgtggtgaccgttctggcgatcaacccggacgagctctacgacgtcgtcgcgatcaac
gccgcctcgatgtccacccagctcgcgggcctgcccttctccggcccgatcggcggcgtg
cgcgtggccctcgtccacgacgagcagggcgcccagtgggtcgcgtttccgaagcactcg
cagctgcagaaggcgacgttcgacatggtcgtcgccgggcgcatcgccggcgatgacgtg
gcgatcatgatggtcgaggccgaggccaccgaccactcctggagcctcatcaaggacgag
ggcgccacggccccgaccgaggaggtcgtcgccgagggcctcgaggccgccaagccgttc
atccgcgcgctctgcgaggcgcagcaggacctggccgaccgcgccgcgaagcccaccgcc
gagttcccggtcttccttgactacgaggccgacgcgtacgacgccgtcgaggcggccgca
gccggcaagctcgcggaggtcttccagatcgccgacaagcaggagcgcgaggcggcgtct
gacgccctcaaggccgaggtcctcgcccagctcgccggccagttcgagggccgcgagaag
gagctctccgcagccttccgctcggtgaccaagaaggtcgtgcgccagcgcatcctcacc
gagcaggtccgcatcgacggccgcggactgacggacatccgccagctcacggccgaggtc
gaggtgctcccgcgggtccacggctcggcgatcttcgagcgcggcgagacccagatcatg
ggcgtcaccacgctgaacatgctcaagatggagcagcagatcgactcgctctcgcctgag
acgcacaagcggtacatgcacaactacaacttcccgccctactccacgggcgagacgggc
cgcgtcggttccccgaagcgccgcgagatcggccacggcgcactggccgagcgcgcgctc
gtgcccgtgctgccctcccgcgaggagttcccgtacgcgatccgccaggtgtccgaggca
ctcggctccaacggctcgacgtcgatgggctccgtgtgcgcctcgacgctgtcgctgctc
aacgccggtgtgccgctgaaggccccggtcgcgggcatcgccatgggcctcgtctccgac
gaggtcgacggccagacccggtacgccgccctcaccgacatcctcggtgccgaggacgcc
ttcggcgacatggacttcaaggtcgccggcacgtccgagttcgtcacggcgatccagctc
gacaccaagctcgacggcatcccggcctcggtcctggccgccgcgctcaagcaggcccgc
gaggcacgcctgcacatcctctcggtgatcaacgccgcgatcgaccgcccggatgagctc
tccgagttcgcgccgcgcatcatcgcgatcaagatcccggtggacaagatcggcgaggtc
atcggccccaagggcaagatgatcaaccagatccaggaggacacgggcgccgagatctcg
atcgaggacgacggcaccgtgctcatcggcgcgaccgacggctcctcggccgaggccgcc
cgcgccgccgtgaacgcgatcgcgaatccgcagctgcccgaggtcggggagcgctacctc
ggcacggtggtcaagaccaccacgttcggcgcgttcgtctcgctcacgccgggcaaggac
ggcctgctgcacatctccgagctgcgcaagctcgccggcggcaagcgcgtggacaacgtc
gaggacgtcgtctccgtcggccagaaggtccaggtcgagatcaccaagatcgacgaccgc
ggcaagctctcgctcgcgcccgtcgtggccgaggccgacgccgccgccgagggcgaggcc
tctgcggaggtcgaagcgtag
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integrated database retrieval system
