Sinomonas atrocyanea: SA2016_2358
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Entry
SA2016_2358 CDS
T04286
Name
(GenBank) Oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
satk
Sinomonas atrocyanea
Pathway
satk03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
satk00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SA2016_2358
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
satk03019
]
SA2016_2358
03009 Ribosome biogenesis [BR:
satk03009
]
SA2016_2358
Messenger RNA biogenesis [BR:
satk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SA2016_2358
Ribosome biogenesis [BR:
satk03009
]
Eukaryotic type
Pre-60S particles
RNases
SA2016_2358
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DUF2476
Motif
Other DBs
NCBI-ProteinID:
AMM33027
UniProt:
A0A127A1H7
LinkDB
All DBs
Position
2547316..2547969
Genome browser
AA seq
217 aa
AA seq
DB search
MPISNEHIVWIDCEMTGLDPVADALIEVAVLVTDSELNVLGDGVDVVIKPSEEALAGMGD
FVRAMHTESKLLDELPRGMTMEAAQAEVMAYIRAWVKEPNKAQLGGNSVGTDRLFLARDM
PEVIEYLHYRVIDVSTIKELARRWYPRAYFQSPAKTGNHRALGDIRDSIDELRYYRETVF
VPAPGPDSSAAREAAERISSGATGTGTPASREAAEKS
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
gtgcccatcagcaacgaacacattgtctggatcgactgcgagatgaccggcctcgacccg
gtcgccgacgccctcatcgaggtggcggtcctcgtcaccgattcagagctcaacgtcctc
ggcgacggagtcgacgtcgtcatcaagccctctgaggaggccctggccggcatgggcgac
ttcgtccgtgccatgcacaccgagtccaagctgctcgacgagctgccccgtggcatgacg
atggaggcggcccaggccgaggtcatggcctacatccgggcgtgggtcaaggagccgaac
aaggcccagctcggcggcaactccgtcgggacggaccggctcttcctggccagggacatg
ccggaggtgatcgagtacctgcactaccgcgtcatcgacgtctcgaccatcaaggagctt
gcgcggcgctggtacccgcgggcctacttccagtcgccggccaagaccgggaaccaccgt
gccctgggtgacatccgtgactccatcgacgagctgcgctactaccgcgagacggtgttc
gtccccgcgcccgggccggactcctcggcggcccgcgaggccgcggagcggatctcctcg
ggagcgaccggcacggggacgccggcgagccgcgaggccgcagaaaaaagttag
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