Sinomonas atrocyanea: SA2016_2671
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Entry
SA2016_2671 CDS
T04286
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
satk
Sinomonas atrocyanea
Pathway
satk03420
Nucleotide excision repair
satk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
satk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SA2016_2671
03430 Mismatch repair
SA2016_2671
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
satk03400
]
SA2016_2671
Enzymes [BR:
satk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SA2016_2671
DNA repair and recombination proteins [BR:
satk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SA2016_2671
MMR (mismatch excision repair)
Other MMR factors
SA2016_2671
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
HRDC
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
HHH
C1_1
Motif
Other DBs
NCBI-ProteinID:
AMM33336
UniProt:
A0A127A2K0
LinkDB
All DBs
Position
complement(2894004..2896127)
Genome browser
AA seq
707 aa
AA seq
DB search
MSGAESAQAAGGTLEERLLAGLDEEQREVATTLHGPVCVLAGAGTGKTRAITHRIAYGVH
SGVYSPQRLLAVTFTARAAAEMRSRLRDLGVGGVQARTFHAAALRQLQYFWPQAVGGSLP
SLLEHKAQAIAEGARRLRLTVDRAAIRDLASEIEWAKVSMLTPSTYLEGAAGRGEPGGLQ
PATVARLFEAYEDVKVDRNLIDFEDVLLITVGILQEDPKVAATVREQYRHFVVDEYQDVS
PLQQRLLELWLGGREELCVVGDASQTIYSFTGATSTHLLEFGKRHPQAAMIRLVRDYRST
PQVVRLANDLLAARRPAGPAADARWAKPLNLIAQRPSGPEPEFAECADDEAEASAVARRI
AALVKAGTEPKDIAVLFRTNGQSEAFEQALAAAGIGYQLRGGERFFNRREVRDGLLQLRG
AARAQADDGVPVAQRVRDVLSSLGYSEQAPTGGGATRERWESLAALVALADELSAARGEG
FGLPEFVAELQERATAQHAPAVQGVTLASLHAAKGLEWDAVFLVGLSEGLVPISFADTPV
TVDEERRLLYVGITRAREFLHLSWSLSRTPGGRAHRRPSRFLDGLRPAGSTSSHAERSPR
KRRELKGPTTCRVCGTILSTGAERKVGRCSGCPPTYEEATFEALRAWRLEQAREADVPAF
VVFTDATLTAIAEAKPSSLDELSQVAGVGRAKLERYGEAVLELIRGA
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
gtgagcggggccgagtccgcccaggccgcgggagggacgctcgaggagcggctcctcgcc
ggcctcgacgaggagcagcgcgaggtcgcgaccaccctgcacgggccggtgtgcgtcctg
gccggggcaggcaccggcaagacgcgggcgatcacccaccggatcgcgtacggcgtccac
tcgggcgtctactcgccccagcgcctccttgcggtcacgttcaccgcgcgggccgccgcc
gagatgcgcagccgcctgcgcgacctcggcgtggggggagtgcaggcccgcacgttccac
gccgcggccctgcggcagctgcagtacttctggccgcaggccgtggggggctcgctgccg
agcctcctcgagcacaaggcccaggccatcgccgagggcgcacggcgcctgcgcctcacc
gtggaccgggccgcgatccgcgacctcgcctcggagatcgaatgggccaaggtctcgatg
ctcacgccctccacctacctcgagggcgccgcgggcaggggagagcccggcggcctccag
ccggccacggtggcgcggctcttcgaggcctacgaggacgtcaaggtggaccggaacctc
atcgacttcgaggacgtcctgctcatcacggtcggcatcctgcaggaggacccgaaggtc
gccgcgaccgtgcgcgagcagtaccgccacttcgtcgtcgacgagtaccaggacgtctcc
ccgctgcagcagcgcctcctcgagctgtggctcggcggccgcgaggagctgtgcgtggtc
ggcgacgcgagccagacgatctactcgttcacgggcgccacgagcacccacctgctcgag
ttcggcaagcgccacccgcaggcggccatgatccggctcgtgcgggactaccgctccacg
ccgcaggtggtccgcctggccaacgacctcctcgcggcccgccgccccgcgggccccgcg
gccgatgcccgctgggcgaagccgctgaacctcatcgcccagcggcccagcgggcccgag
cccgaattcgccgagtgcgccgacgacgaggcggaggcgtccgccgtggcccgcaggatc
gccgccctcgtcaaggcgggcaccgagcccaaggacatcgcggtgctcttccgcaccaac
ggccagtccgaggcgttcgagcaggccctcgccgcggccggcatcggctaccagctgcgc
ggcggcgagcggttcttcaaccgccgcgaggtccgcgacgggctcctgcagctccgcggt
gccgcccgcgcccaggcggacgacggcgtgccggtggcgcagcgggtgcgcgatgtcctc
tcctcgctgggctactccgagcaggcgcccacgggcgggggcgccacgcgcgagcgctgg
gagtcgcttgccgccctcgtggccctcgccgacgagctctccgccgcgcggggcgagggg
ttcgggctgcccgagttcgtggccgagctgcaggagcgggccacggcccagcacgcaccg
gccgtccagggcgtgacgctcgcgtcgctgcacgccgcgaagggcctcgagtgggacgcg
gtgttcctcgtggggctgagcgaaggcctcgtgccgatctccttcgccgacacgcccgtg
acggtggacgaggagcggcgcctgctgtacgtcgggatcacccgggcccgggagttcctg
cacctgtcgtggtccctgtcccgcaccccgggcgggcgcgcgcaccgccgtccgtcgcgg
ttcctcgacggcctgcggcccgcgggctcgacctcctcgcacgccgagcgcagcccccgc
aagcgccgggagctgaaggggcccaccacgtgccgcgtgtgcgggacgatcctctcgacc
ggggccgagcggaaggtcggccgctgctccgggtgcccacccacctacgaggaggccacg
ttcgaggcgctgcgcgcgtggcgccttgagcaggcgcgcgaggcggacgtgccggccttc
gtcgtgttcacggacgcgaccctgacggccatcgcggaggcgaagccctcgagcctggac
gagctgtcccaagtggccggtgtggggcgggccaagctcgagcgctacggcgaggcagtc
ctggagctcatccgtggcgcgtga
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