KEGG   Sinomonas atrocyanea: SA2016_2903
Entry
SA2016_2903       CDS       T04286                                 
Name
(GenBank) RNA polymerase sigma factor, SigF-like protein
  KO
K03090  RNA polymerase sigma-B factor
Organism
satk  Sinomonas atrocyanea
Brite
KEGG Orthology (KO) [BR:satk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:satk03021]
    SA2016_2903
Transcription machinery [BR:satk03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     SA2016_2903
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r3 Sigma70_r2 Sigma70_r4_2 HTH_23 HTH_Crp_2 MarR HTH_24 MarR_2 HTH_AsnC-type HTH_28 HTH_3 HTH_38 HTH_5 HTH_20 KORA Sigma70_ECF HTH_37 HTH_Tnp_ISL3 HTH_IclR Trp_repressor HTH_10 HTH_1 DUF134 TrmB GntR YdaS_toxin TnsD Vir_act_alpha_C
Other DBs
NCBI-ProteinID: AMM33568
UniProt: A0A127A277
LinkDB
Position
complement(3137737..3138474)
AA seq 245 aa
MESRSPLTVLAGGREGASSGGAGALVVEHLGLADALARRHRVPGHDFEDIRQVARMGLVM
AAQRYREGAGHGFVQFAVPTIAGTIKRYLRDQSWVVRPPRSLQELRLGVKEARGRLVQEL
GREPSLAELGEATGASPEQVAEARSVDAAMSPAAIEPLDSSGEGEGERTAHLVPVVEAGF
EQVELRQMVACALEGASEQDRLLVKLRFVDEMSQSEIAAELGVSQMQVSRLLRRLLDRMR
RKMAA
NT seq 738 nt   +upstreamnt  +downstreamnt
atggagtcgaggagtcccctgacggtcctcgccgggggccgcgagggtgcctcgtccggt
ggcgcgggggcgttggtggtggagcatctgggtttggcggatgcgctggcgcggcggcac
cgggtgcccgggcatgacttcgaggacatccggcaggtggcgcggatggggctggtgatg
gcggcgcagcggtaccgggagggtgccgggcacgggttcgtgcagttcgcggtgcccacg
attgccgggacgatcaagcgctatctgcgggaccagtcctgggtggtgcgcccgccgcgg
tcgctgcaggagctgcggctgggggtcaaggaggcccgtggccggctggtgcaggagctg
ggccgggagccgtccctggcggagctgggggaggcgacgggggccagcccggagcaggtc
gcggaggcccgctcggtggatgcggcgatgagcccggcggcgatcgagccgctggattcc
tcgggcgagggcgagggggagcgcacggcgcacctggtcccggtggtcgaggcggggttc
gagcaggtggagctgcggcagatggtcgcgtgcgcgctggagggtgcgagcgagcaggat
cggctgctggtgaagctgcggttcgtggacgagatgagccagtctgagatcgccgcggag
ctgggggtgtcccagatgcaggtctcgcgcctgctgcgccggctcctggaccgcatgcgc
cgcaagatggccgcctga

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