Sinomonas atrocyanea: SA2016_2903
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Entry
SA2016_2903 CDS
T04286
Name
(GenBank) RNA polymerase sigma factor, SigF-like protein
KO
K03090
RNA polymerase sigma-B factor
Organism
satk
Sinomonas atrocyanea
Brite
KEGG Orthology (KO) [BR:
satk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
satk03021
]
SA2016_2903
Transcription machinery [BR:
satk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SA2016_2903
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
HTH_23
HTH_Crp_2
MarR
HTH_24
MarR_2
HTH_AsnC-type
HTH_28
HTH_3
HTH_38
HTH_5
HTH_20
KORA
Sigma70_ECF
HTH_37
HTH_Tnp_ISL3
HTH_IclR
Trp_repressor
HTH_10
HTH_1
DUF134
TrmB
GntR
YdaS_toxin
TnsD
Vir_act_alpha_C
Motif
Other DBs
NCBI-ProteinID:
AMM33568
UniProt:
A0A127A277
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All DBs
Position
complement(3137737..3138474)
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AA seq
245 aa
AA seq
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MESRSPLTVLAGGREGASSGGAGALVVEHLGLADALARRHRVPGHDFEDIRQVARMGLVM
AAQRYREGAGHGFVQFAVPTIAGTIKRYLRDQSWVVRPPRSLQELRLGVKEARGRLVQEL
GREPSLAELGEATGASPEQVAEARSVDAAMSPAAIEPLDSSGEGEGERTAHLVPVVEAGF
EQVELRQMVACALEGASEQDRLLVKLRFVDEMSQSEIAAELGVSQMQVSRLLRRLLDRMR
RKMAA
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgaggagtcccctgacggtcctcgccgggggccgcgagggtgcctcgtccggt
ggcgcgggggcgttggtggtggagcatctgggtttggcggatgcgctggcgcggcggcac
cgggtgcccgggcatgacttcgaggacatccggcaggtggcgcggatggggctggtgatg
gcggcgcagcggtaccgggagggtgccgggcacgggttcgtgcagttcgcggtgcccacg
attgccgggacgatcaagcgctatctgcgggaccagtcctgggtggtgcgcccgccgcgg
tcgctgcaggagctgcggctgggggtcaaggaggcccgtggccggctggtgcaggagctg
ggccgggagccgtccctggcggagctgggggaggcgacgggggccagcccggagcaggtc
gcggaggcccgctcggtggatgcggcgatgagcccggcggcgatcgagccgctggattcc
tcgggcgagggcgagggggagcgcacggcgcacctggtcccggtggtcgaggcggggttc
gagcaggtggagctgcggcagatggtcgcgtgcgcgctggagggtgcgagcgagcaggat
cggctgctggtgaagctgcggttcgtggacgagatgagccagtctgagatcgccgcggag
ctgggggtgtcccagatgcaggtctcgcgcctgctgcgccggctcctggaccgcatgcgc
cgcaagatggccgcctga
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integrated database retrieval system