Sinomonas atrocyanea: SA2016_2932
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Entry
SA2016_2932 CDS
T04286
Name
(GenBank) RNA polymerase sigma factor, SigF-like protein
KO
K03090
RNA polymerase sigma-B factor
Organism
satk
Sinomonas atrocyanea
Brite
KEGG Orthology (KO) [BR:
satk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
satk03021
]
SA2016_2932
Transcription machinery [BR:
satk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SA2016_2932
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
MarR
MarR_2
HTH_24
HTH_AsnC-type
HTH_28
DUF7343
HTH_3
HTH_20
HTH_37
HTH_5
KORA
Sigma70_ECF
HTH_IclR
Trp_repressor
HTH_38
HTH_10
HTH_Tnp_ISL3
HTH_1
YdaS_toxin
DUF134
TrmB
GntR
Vir_act_alpha_C
Dimerisation
Motif
Other DBs
NCBI-ProteinID:
AMM33597
UniProt:
A0A127A333
LinkDB
All DBs
Position
complement(3165112..3165915)
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AA seq
267 aa
AA seq
DB search
MSESAVIESKGSLRLLAGDLAEDAAQAGRASEGAAGEGAGSGVAGALVVEHLGLADALAR
RHRVPGHDFEDIRQVARMGLVMAAQRYREGAGHGFVQFAVPTIAGTIKRYLRDQSWVVRP
PRSLQELRLGVKEARGRLVQELGREPSLAELGEATGASPEQVAEARSVDAAMSPAAIEPL
DSSGEGEGERTAHLVPVVEAGFEQVELRQMVACALEGASEQDRLLVKLRFVDEMSQSEIA
AELGVSQMQVSRLLRRLLDRMRRKMAA
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgagtcagctgtgatcgagtccaagggatccctgaggctcctcgccggggacctg
gcggaggacgccgcccaggcgggacgtgcgtccgagggcgctgccggcgagggtgcgggg
tccggtgtggcgggggcgttggtggtggagcacttggggctggcggatgcgctggcgcgg
cggcaccgggtgcccgggcatgacttcgaggacatccggcaggtggcgcggatggggctg
gtgatggcggcgcagcggtaccgggagggtgccgggcacgggttcgtgcagttcgcggtg
cccacgattgccgggacgatcaagcgctatctgcgggaccagtcctgggtggtgcgcccg
ccgcggtcgctgcaggagctgcggctgggggtcaaggaggcccgtggccggctggtgcag
gagctgggccgggagccgtccctggcggagctgggggaggcgaccggggccagcccggag
caggtcgcggaggcccgctcggtggatgcggcgatgagcccggcggcgatcgagccgctg
gattcctcgggcgagggcgagggggagcgcacggcgcacctggtcccggtggtcgaggcg
gggttcgagcaggtggagctgcggcagatggtcgcgtgcgcgctggagggtgcgagcgag
caggaccggctgctggtgaagctgcggttcgtggacgagatgagccagtctgagatcgcc
gcggagctgggggtgtcccagatgcaggtctcgcgcctgctgcgccggcttctggaccgc
atgcgccgcaagatggccgcctga
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