Sinomonas atrocyanea: SA2016_3284
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Entry
SA2016_3284 CDS
T04286
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
satk
Sinomonas atrocyanea
Brite
KEGG Orthology (KO) [BR:
satk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
satk03032
]
SA2016_3284
03400 DNA repair and recombination proteins [BR:
satk03400
]
SA2016_3284
Enzymes [BR:
satk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SA2016_3284
DNA replication proteins [BR:
satk03032
]
Prokaryotic type
DNA Topoisomerases
SA2016_3284
DNA repair and recombination proteins [BR:
satk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SA2016_3284
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
AMM33947
UniProt:
A0A127A474
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Position
complement(3536791..3539568)
Genome browser
AA seq
925 aa
AA seq
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MATKARTGKKLVIVESPAKSKTIAQYLGDGFEVDASMGHIRDLPQPSDLPAELKKSSVGK
FAVDIEHGFEPYYVVSPDKKKKVAELKAKLKDADELYLATDGDREGEAIAWHLLEVLKPK
VPVHRLTFPEITKEAIQRAMAELRDVDESLVDAQETRRVLDRLYGYEISPVLWRKVAGGL
SAGRVQSVATRLVVERERERMAFRAASYWDLLATLAPAGKGADDAAARQSFQARLAQVDG
KKVATGRDFDDRGQLKAKNAELLTEATATALAEGLRDAAFAVRSVEEKPYTRRPAAPFTT
STLQQEAARKLRFSARVTMQVAQRLYENGYITYMRTDSTALSDQAVTAARRQASELYGAE
YIPARPRVYASKSKNAQEAHEAIRPSGDSFRTPAQVAKQLSGDEFRLYELIWKRTVASQM
EDAKGSTATVRLGATAVSGEAAGRDAEFAASGTVITFRGFLAAYEEGRDEVREDTENAAS
GSGAGSGEGGRLPVLAEGQALDALEITSNGHQTSPPPRYTEASLVKTLEERGIGRPSTYA
ATISTIMDRGYVRSRGTALVPSWIAFSVVRLLEEHFHDYVDYDFTAEMEEDLDKIAAGQQ
AGSDWLSHFYFGDGTNPGLTTIVNGLGEIDAREVNSVEIAPGIVLRVGKYGPYLEKPLPA
DAPEGTVPERANVPEDLAPDELTAEKALELMESAGPEERVLGQDPHTGHTVVAKNGRYGA
YVTEVIPELTPEQIAAQPVEYYKNGKPKPPKKPVKVKPRTASLFKSMTLDTVTLEQALQL
LTLPRRLGEDAEGTAITVQNGRFGPYLKKGTDSRSIGSEEEIFTITLEQALEIYSQPKTR
GGRTAAAPLAEFGEDPASGKPIVVKEGRFGPYITDGETNITVPRATAIEELTRERAIELL
AEKRAKGPAKKPVRRSGGRAKAGAK
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
gtggccacgaaggctagaaccggcaagaagctcgtgatcgtggagtcgccggccaagagc
aagacgatcgcccagtacctgggcgacggcttcgaagtcgacgcgtcgatgggccacatc
cgcgaccttccccagccctcggacctgcccgccgagctcaagaagtcctcggtgggcaag
ttcgccgtggacatcgagcacggcttcgagccctactacgtggtctcccccgacaagaag
aagaaggttgcggagctcaaggccaagctcaaggacgccgacgagctctacctcgccacc
gatggcgatcgcgagggcgaggccatcgcgtggcacctgctcgaggtgctcaagcccaag
gtgcccgtgcaccgcctgaccttccccgagatcaccaaggaagcgatccagcgcgccatg
gcggagctgcgcgatgtcgacgagtcgctcgtcgacgcccaggagacccgccgcgtcctg
gaccgcctgtacggctacgagatctccccggtgctctggcgcaaggtcgccggcggcctg
tcggccggccgcgtgcagtccgtggcgacccggctcgtggtggagcgggagcgcgagcgc
atggccttccgcgccgcgagctactgggacctcctcgcgaccctcgctccggccgggaag
ggcgcggacgacgccgccgcccgccagagcttccaggcccgcctcgcgcaggtggacggg
aagaaggtggccaccgggcgcgacttcgacgaccgcggccagctcaaggccaagaacgcc
gagctgctcacggaggcgaccgcgacggcgctcgcggagggcctgcgggacgccgccttc
gccgtccgctccgtcgaggagaagccgtacacccggcgcccggcggcccccttcacgacc
tccaccctccagcaggaggccgcccgcaagctgcggttctccgcgcgggtgacgatgcag
gttgcccagcgcctgtacgagaacggctacatcacctatatgcgtacggactccacggcg
ctgtcggaccaggccgtgacggccgcgcggcggcaggcctcggagctctacggggcggag
tacatcccggcgaggccccgcgtgtacgcgtccaagtcgaagaacgcccaggaggcccac
gaggccatccgcccctcgggggactccttccggacccccgcccaggtcgccaagcagctc
tccggggacgagttccgcctctacgagctcatctggaagcgcacggtcgcctcccagatg
gaggacgcgaagggctccaccgcgaccgtccgcctcggcgcgacggccgtctccggcgag
gccgccggccgggacgccgagttcgctgcctccggcacggtcatcacgttccgaggcttc
ctcgccgcgtacgaggagggccgcgacgaggtccgcgaggacacggaaaacgctgcgagc
ggctcgggtgcaggctccggcgagggcggccgcctcccggtgctcgccgaggggcaggcc
ctcgacgccctcgagatcacctccaacggccaccagacctccccgcccccgcgctacacg
gaagcctccctcgtgaagacgctcgaggagcgcgggatcggccgcccgtccacctacgcg
gcgacgatctccacgatcatggaccgcgggtacgtccgcagccgcggcacggcgctcgtg
cccagctggatcgcgttctcggtcgtccggctgctcgaggagcacttccacgactacgtc
gactacgacttcaccgccgagatggaggaggacctcgacaagatcgccgcgggccagcag
gccggctccgattggctgagccacttctacttcggcgacggcaccaacccgggcctgacc
acgatcgtcaacgggctcggcgagatcgacgcgcgcgaggtcaactcggtcgagatcgcc
cccggcatcgtgctgcgcgtgggcaagtacgggccgtacctcgagaagccgctcccggcg
gacgctcccgagggcacggtccccgagcgcgccaacgtccccgaggacctcgccccggac
gagctcaccgcggagaaggcgctcgagctcatggagagcgccggccccgaggagcgcgtc
ctcggccaggacccgcacaccgggcacacggtcgtggccaagaacggccgttacggcgcc
tacgtcaccgaggtcatccccgagctgacgcccgagcagatcgcagcccagccggtggag
tactacaagaacggcaagccgaagccgcccaagaagcccgtcaaggtcaagccccgcacg
gccagcctgttcaagtcgatgaccctggacaccgtgaccctcgagcaggccctgcagctg
ctcacgctcccgcgccgcctcggcgaggacgcggagggcaccgcgatcacggtgcagaac
ggccggttcggcccgtacctgaagaagggcaccgattcgcgctcgatcggctccgaggag
gagatcttcacgatcaccctcgagcaggcgctcgagatctactcccagcccaagacacgc
ggcggccggactgccgcggcgccgctggcagagttcggggaggacccggcctccggcaag
ccgatcgtggtcaaggagggccgcttcgggccgtacatcacggacggcgagacgaacatc
accgttccacgggccaccgccatcgaggaactcacccgggagcgcgccattgagctcctt
gccgagaagcgggccaagggcccggccaagaagcccgtccggcgttcgggcggccgagcg
aaggcaggtgccaagtga
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