Sinomonas atrocyanea: SA2016_3489
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Entry
SA2016_3489 CDS
T04286
Name
(GenBank) DNA repair protein
KO
K10979
DNA end-binding protein Ku
Organism
satk
Sinomonas atrocyanea
Pathway
satk03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
satk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
SA2016_3489
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
satk03400
]
SA2016_3489
DNA repair and recombination proteins [BR:
satk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
SA2016_3489
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Zn_Ribbon_TF
Desulfoferrod_N
DUF5321
Motif
Other DBs
NCBI-ProteinID:
AMM34149
UniProt:
A0A127A401
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All DBs
Position
complement(3758606..3759577)
Genome browser
AA seq
323 aa
AA seq
DB search
MWNVRFTGLMRSIWKGAISFGLVSVPVKVYSATEDHDLKLHQVHDKDRGRIRYQRRCEVC
GEVVEYADIDKAYEEGGRTVVLTDEDLKSLPVERSREIEVVEFVPDTQIDPMYFEKSYYL
EPEKVGVKPYQLLRRTLEQTELTAVVKFALRQKSRLGALRVRGDVMVLQALLWPDEVREA
AFPVLEDTEVKISDKELKMSSSLVESLSSDFEPGQFTDEYQAQLTQLVEAKLAKGDAVDT
EETFGAPAEEGEGAEVLDLMEALRRSVENRRKAAGGAKESSGAKAPKASAGGRSRAKKAE
ADDAEDSPQEQKAPPKRRTRKTG
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
gtgtggaatgtgcggttcactgggctcatgcggtcaatctggaagggcgccatcagcttc
ggcctggtcagcgtgcccgtgaaggtgtacagcgccaccgaggaccatgacctcaagctg
caccaggtccatgacaaggaccgggggcgcatccgctaccagcgccgctgcgaggtctgc
ggggaggtcgtcgagtacgcggacatcgacaaggcgtacgaggagggcggccgcacggtc
gtcctcacggacgaggacctcaagtccctgccggtggagcgcagccgggagatcgaggtg
gtcgagttcgtcccggatacgcagatcgaccccatgtacttcgagaagagctactacctc
gagcccgagaaggtcggggtgaagccgtaccagctcctgcggcgcaccctcgagcagacc
gagctgaccgccgtggtgaagttcgcgctgcggcagaagtcccgcctgggggcgctgcgc
gtgcgcggggacgtcatggtgctccaggcgctgctgtggcccgacgaggtgcgggaggcg
gcgttccccgtgctcgaggacaccgaggtgaagatctcggacaaggagctgaagatgtcc
tcctccctcgtcgagagcctctcctccgacttcgagccggggcagttcaccgacgagtac
caggcccagctgacgcagctggtcgaggccaagctcgccaagggcgatgccgtggacacc
gaggagacgttcggcgccccggccgaggagggcgagggcgccgaggtcctggacctcatg
gaggccctgcgccgcagcgtcgagaaccggcgcaaggccgcgggcggcgcgaaggagtcc
tccggcgccaaagctccgaaggcatccgcaggcggccgcagccgcgcgaagaaggcggag
gcggacgacgccgaggactcgcctcaggagcagaaggcgccgcccaaacggcgcacccgc
aagaccggctga
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