Spiroplasma mirum GNAT3597: SATRI_v1c00100
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Entry
SATRI_v1c00100 CDS
T03973
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
satr
Spiroplasma mirum GNAT3597
Pathway
satr03030
DNA replication
satr03430
Mismatch repair
satr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
satr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SATRI_v1c00100 (holB)
03430 Mismatch repair
SATRI_v1c00100 (holB)
03440 Homologous recombination
SATRI_v1c00100 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
satr03032
]
SATRI_v1c00100 (holB)
03400 DNA repair and recombination proteins [BR:
satr03400
]
SATRI_v1c00100 (holB)
Enzymes [BR:
satr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SATRI_v1c00100 (holB)
DNA replication proteins [BR:
satr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SATRI_v1c00100 (holB)
DNA repair and recombination proteins [BR:
satr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SATRI_v1c00100 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
Motif
Other DBs
NCBI-ProteinID:
AKM52621
LinkDB
All DBs
Position
12596..13441
Genome browser
AA seq
281 aa
AA seq
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MMINNFAPADLKKLNILKEKINNNLLPNQLIISSNNITKLNEFAKLLSMFLVCEKERTFD
CDCANCVRIQNNTYYDLKAYGDFNTSIKKEEIQNIIEVFNYSALENKGVKIYIIKGGDLL
TLEAANALLKFLEEPTDNTYAIILSNQRNRIIETIKSRCLNIILTNDFNAVKDESDDAKQ
KFVQAFFKNLVHQKNNNYILIRQLFDYTPINCYEYLSEIANVIKNNKWEQYNLDEKEILS
LLKPIKHHIIEECSSACNLLGGSFNKELILEQAIIKINQVV
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgatgattaataattttgcaccagcagatttaaaaaaacttaatatcttaaaagaaaaa
attaataataatcttttacctaatcaattaataatttcatcaaataatataacaaaatta
aatgaatttgctaaacttcttagtatgtttttagtttgtgaaaaagagcggacttttgat
tgtgactgtgcaaattgtgttagaattcaaaacaatacttattatgatttaaaagcatat
ggtgattttaatactagtattaaaaaagaagaaattcaaaatattattgaagtttttaat
tactctgctttagaaaacaaaggagtaaagatctatattattaaaggaggagacttacta
actttagaagcggctaatgctttgttaaagtttttagaagaaccaaccgataatacatat
gccattattttatctaatcaacgcaacagaattattgaaacaattaaatcacgatgctta
aatattattttaacaaatgattttaatgcggttaaagatgagagtgatgatgccaaacaa
aagtttgtgcaagctttttttaaaaatcttgttcaccaaaaaaataacaattatatttta
attcgccaattatttgattatacaccaattaactgttatgaatatttatctgaaattgct
aatgtcatcaagaataataagtgagaacaatataacctagatgaaaaagaaatactctcg
ttattaaaaccaattaaacatcatattattgaagaatgttcttcagcatgtaatctttta
gggggaagttttaacaaggaattaattttagaacaagcaataattaaaattaaccaggtg
gtataa
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