Spiroplasma mirum GNAT3597: SATRI_v1c10440
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Entry
SATRI_v1c10440 CDS
T03973
Symbol
yhaM
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
satr
Spiroplasma mirum GNAT3597
Brite
KEGG Orthology (KO) [BR:
satr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
satr03019
]
SATRI_v1c10440 (yhaM)
Messenger RNA biogenesis [BR:
satr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SATRI_v1c10440 (yhaM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HD
TraI_2
tRNA_anti-codon
CDC24_OB3
Motif
Other DBs
NCBI-ProteinID:
AKM53406
LinkDB
All DBs
Position
complement(939030..939974)
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AA seq
314 aa
AA seq
DB search
MNIKDLTTEANNITLIAIADKVSQAVASNGNTYLTILLKDKTGTIEARLWDAKPHDLETW
VKGNFYKVNINVIEYRKVLQAKINSYDVVDNETVNLEDFIPIAPLDKELMYHGILETINN
LTNSDYQNIMRLILQKYGEHFKIWPAAIRNHHEIQSGLLWHSLTMLQMAKAVGNVYHDRL
IDLDLLYCGIILHDLGKVVEITTGTSSDFSLEGKLLGHISIMANELHTIAKEHNLYNDNI
ILLEHMILASHGRLEYGSPVEPHILEAEILSFLDNLDARIYRIDKELEKVELNGQTPRLL
SVENRWFIKHFNKK
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgaatataaaagacttaacaacagaagctaataatattactttaattgccattgcggat
aaggtctcgcaagctgtggcaagtaatggtaatacttatttgacaattttactaaaagat
aaaactggaacaattgaagctcgattatgagacgccaaacctcatgatttggaaacttga
gttaaagggaatttttataaagtaaatattaatgtgattgaataccgtaaggttttacaa
gcaaaaattaatagttatgatgttgttgataatgaaacagttaacttagaagatttcatt
cctattgccccacttgataaggaacttatgtaccatggaattttagagacaataaataat
ttaaccaacagcgattatcaaaacattatgcggttaattttacaaaaatatggagaacat
tttaaaatttgaccagccgctattcgtaatcaccatgaaattcagtcgggactactatga
catagtttaacaatgttacaaatggcaaaagctgttgggaatgtttaccatgatcgctta
attgatttagatttattatattgtggaattattctacatgatttaggaaaagtagttgaa
attacaaccggaacaagtagtgacttttcattagaaggtaagttattaggacatatttca
attatggctaatgagttacatacaattgccaaagaacataatttatataatgataatatt
attttgttagagcatatgattttagctagccatggtcggttagaatatggttcaccagtt
gaaccccatattttagaagctgagattttatcatttttagataatttagatgcccgaatt
tatcggattgataaagaactagaaaaagttgagttaaatggtcagaccccacggttatta
tcagtggaaaaccgttggtttattaaacattttaataaaaaataa
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