Spiroplasma mirum GNAT3597: SATRI_v1c10900
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Entry
SATRI_v1c10900 CDS
T03973
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
satr
Spiroplasma mirum GNAT3597
Pathway
satr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
satr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SATRI_v1c10900 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
satr03400
]
SATRI_v1c10900 (uvrB)
DNA repair and recombination proteins [BR:
satr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SATRI_v1c10900 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SATRI_v1c10900 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_7
P-loop_SecA
AAA_22
AAA_30
TrwB_AAD_bind
DUF87
HerA_C
AAA
AAA_16
AAA_19
AAA_5
Motif
Other DBs
NCBI-ProteinID:
AKM53451
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Position
complement(986070..988034)
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AA seq
654 aa
AA seq
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MFKLVSDYKPSGDQPVAINEITAGILANKRHQVLLGATGTGKTFTMANVINQINKPTLVM
AHNKTLAMQLYVELKELFPDNRVEYFVSNFDFYQPEAYVPSKDLYIDKDAKQNMELDMMR
LSALNALSTTKDVIVVASVAAIYGAQDPREYRKSFFELKRNQILSKKELSAYLVGSGYTR
NDIELIPGTFSAKGDIIKIAPGWNMKNFIRLDLFGDEIDDISVVDGLTGDIIQKLTNLTI
FPAQDYITSPERMKIAIENIEKELQERLAELRSQGKILEATRLEQRTEYDLDALRETGIC
SGIENYSRHLDLRQPGEPPYTLIDYFGTDFLTIIDESHMTLPQIRAMYNTDRSRKETLVN
YGFRLPSALDNRPLNFDEFNQKLKNIVYISATPGDYELELLNNQVTQQIIRPTGLLDPTV
EVKPTVGQIDDIIAQIKLRREKNERVFITTLTIRMSEDLTSYLQEQNIKVAYLHSELKTL
ERSQILLELRKGVYDCIVGVNLIREGIDIPEVSLICILDADKQGFLRNERSLIQTIGRAA
RNANGHVILYADRISDAMAKAMKETLRRRSIQNDYNIMNEIKPQTIIKPIRDYTNIKIRD
DKLHKIKNKNSKEYKTAKEALLNDLRKEMYQASEKLDFAKAAELRDIIIEIEAQ
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaattagtatcagattataaaccatctggtgaccaaccagttgcaattaatgaa
attaccgcgggaatacttgcgaataaacgtcatcaagttttattaggagctacgggaacc
ggaaaaacttttacgatggccaatgttattaatcaaattaataaaccaactttagtaatg
gctcataataaaacgttagcaatgcaattatatgttgaactaaaagagttgtttcccgat
aaccgcgtggaatactttgttagtaactttgatttttaccaaccagaagcttatgttccc
agtaaagatttgtatattgataaagatgctaaacaaaatatggaattagatatgatgcgc
ttaagtgccttaaatgcactttcaacaacaaaagatgttattgttgttgcttcagtagca
gcaatttatggggcccaggatccccgtgagtatcggaaatcattttttgaattaaaacgg
aatcaaattttaagtaaaaaagaattatcagcttatttagttggctctggatatacgcga
aatgacattgaattaattcccggaacttttagtgcaaaaggtgatattattaaaattgcg
ccagggtgaaatatgaaaaattttattcggttagatttatttggtgatgaaattgatgat
atttcggttgttgatgggttaaccggcgatattattcaaaaattaacaaacttaacaatt
tttccagcccaggattatattacgagccccgaacgtatgaaaattgccattgaaaatatt
gaaaaagaactccaagaacggttggcagagttacgcagtcagggaaaaattttggaagca
actagattagaacaacgtacagaatatgatttagatgccttacgcgaaaccgggatttgt
tcaggaattgaaaactattcacgacatttggatttacgtcaaccgggtgaaccaccatat
actttaattgattattttggaactgattttttaacaatcattgatgaatcccacatgacc
cttccgcaaattagagcaatgtataatactgatcgcagtcggaaagaaaccttagttaat
tatggttttcgtctaccaagtgctttggataatcgtccattaaactttgatgagtttaac
caaaagttaaaaaatattgtttatatttccgccaccccgggtgattatgaattagaatta
ctaaataaccaagtaacccaacaaattattcgtccgactggtttattagacccaactgtc
gaagttaaaccaactgttggccaaattgatgatattattgcacaaattaaattacgaaga
gaaaaaaatgaacgggtatttattacaactttaacaattcggatgtcagaggatttaacc
agttatttacaagaacaaaatattaaagtggcttatcttcatagtgaattaaaaacgtta
gaacgcagtcaaattttactagaacttcgcaagggagtttatgattgtattgtcggagtt
aacttaattcgggaagggattgatattcctgaagtttcgttaatttgtattttagatgct
gataaacaaggatttttaagaaatgagcgaagtttaattcaaacgattggacgagctgca
cggaatgctaatgggcatgttattttatatgcggatcgcatttctgatgcgatggcaaaa
gcaatgaaagaaactcttcgtcgccgtagcattcaaaatgactataatattatgaatgaa
attaaaccgcaaactattattaaaccaattcgtgactacactaacattaaaattcgcgat
gataaattacataaaattaaaaataaaaattccaaagaatacaaaacagcaaaagaagcc
ttattgaatgatttacgaaaagaaatgtaccaggctagtgaaaaattggattttgcaaaa
gcagcagagttgcgggatattattattgaaattgaagcccaataa
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