Spiroplasma mirum GNAT3597: SATRI_v1c12480
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Entry
SATRI_v1c12480 CDS
T03973
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
satr
Spiroplasma mirum GNAT3597
Pathway
satr03030
DNA replication
satr03410
Base excision repair
satr03420
Nucleotide excision repair
satr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
satr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SATRI_v1c12480 (polA)
03410 Base excision repair
SATRI_v1c12480 (polA)
03420 Nucleotide excision repair
SATRI_v1c12480 (polA)
03440 Homologous recombination
SATRI_v1c12480 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
satr03032
]
SATRI_v1c12480 (polA)
03400 DNA repair and recombination proteins [BR:
satr03400
]
SATRI_v1c12480 (polA)
Enzymes [BR:
satr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SATRI_v1c12480 (polA)
DNA replication proteins [BR:
satr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SATRI_v1c12480 (polA)
DNA repair and recombination proteins [BR:
satr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SATRI_v1c12480 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SATRI_v1c12480 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_2
HHH_5
DUF4898
HHH
Motif
Other DBs
NCBI-ProteinID:
AKM53581
LinkDB
All DBs
Position
complement(1134580..1137189)
Genome browser
AA seq
869 aa
AA seq
DB search
MNKVLLIDGNSLVFRAFYATAYGGEMLKSMDGIPTNAVYAFANMLNKILKENNYYSVVVA
FDKNKKNFRHDLLANYKEGRSKPPQELITQFPIVKEYLDNYNIPYLEQDGYEADDLIGCL
SKLAETENYYVDILSSDKDLFQLISPKTNVLVTKQGISNIEIIDEKALHERWGITPSQVP
DLKGLMGDPSDNLKGVPGVGEKTAIKLVKEYGSLENLYQNIDEIKGSLHNNLVMAKNDAL
LCKQVATIVCDVALTNFSFAPINHGNDKLIDFYLKYNMNSFVGKLFNGKEKKISDHLKVS
IIEEWKKEYQADQNVVYLELFDENYHLSEIIAFAIINSQGIFYYDFNIAKFDQTFLEFLA
DSQYEKWTYNVKSLIVSLHRSNININNITYDMMLAGYVYNSNIKNSFDSYIKLFSNKQIL
SDELFYGKGIKKEIPNDLTRLSHFICKKANYIYTLHDQIINLLKTNEQYELYYDIELPTA
FALAQMEINGVKVDREELQRQTLRIEQIVNNLNQEINTMSNREINPNSPKQVSELLFKDL
ALPDYKKGSTAQEVLEGIKLAHPIVAKILDYRKYQKLYSTYLKGMEKYIFKDGKVHTIYK
QTLTNTGRLSSVEPNMQNISIRDEVQREVRKIFTVSNNNNILLSCDYSQIELRILAHMSK
DADLIVAFNRGEDIHTNTAMKIFNLPKEQITPNIRRSAKAVNFGIIYGISDFGLANDLNI
SVAKAKEIIANYYSQFPTIKKFIDTQVEFCKKNGYVKTIFNRKRYVPEINDHNYMQREFG
KRVAMNMPIQGSAADIIKIALKNIDQKFKELHLQSKIIAQIHDELIFEVVKDELSQVQTI
VKELMENSTKLDVKLTVDMKTGYSWYKLK
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaagttttattaattgatgggaactccttagtgttccgggctttttatgcaacg
gcatatgggggagaaatgttgaaaagtatggatggcatacctaccaatgctgtttatgct
tttgccaatatgttaaataaaatcttaaaagaaaataattattattcggtagttgttgcc
tttgataaaaataaaaagaattttcgccatgatttattagcgaattataaggaggggcga
agtaaacccccccaggaattaattactcagtttccaattgttaaagagtatctagataat
tataatattccttatttagaacaagatggttatgaagcggatgatttaattgggtgttta
tcaaaattagcagaaactgaaaattattatgttgacattttatcaagtgataaagacctt
ttccaattaatttcacccaaaactaatgtgttagtaactaagcagggaatttctaatatt
gaaattattgatgaaaaagctttgcacgaaagatgaggaattacaccgagccaagttccc
gatttaaaaggactgatgggtgatccttctgataatttaaaaggggttcctggtgttggt
gaaaaaacagcgattaaattagttaaagaatatggaagtttagaaaatttatatcaaaat
attgatgaaatcaaggggagcttacataataatttagttatggcaaaaaatgatgcttta
ttatgtaaacaagtagcaaccattgtttgtgatgttgctttaactaattttagttttgca
cccattaatcatggcaatgataaactaattgatttttatttaaaatataatatgaattcg
tttgtgggcaaattatttaatggtaaagaaaaaaaaattagcgatcatcttaaagttagc
attatcgaagaatgaaaaaaagagtaccaagctgaccaaaatgtcgtttacttagaactt
tttgatgaaaattaccatttatcagaaatcattgcgtttgcaattattaatagtcagggt
attttttactatgattttaatattgctaaatttgaccaaacgtttttagaatttttagcc
gattcccaatacgaaaaatgaacatataatgtaaaaagtttaattgtcagtttacaccgt
tcaaatattaatattaataatattacttatgatatgatgctcgctggttatgtttataat
tctaatattaagaattcctttgattcttatattaagttattttctaataaacaaatttta
agtgatgagttattttatgggaaagggattaaaaaagaaattcctaatgatttaactcga
ttaagtcattttatttgtaaaaaagctaattatatttataccctgcatgatcaaattatt
aatttattaaaaacaaacgaacaatatgagttatattatgatattgaattgccaactgct
ttcgctttagctcaaatggaaattaacggggttaaagttgatcgtgaagaattacaaaga
caaaccttacgaattgaacaaattgttaataatttaaaccaagaaattaatacaatgagt
aatcgcgaaattaatccgaactctccaaaacaggtttctgaattattatttaaagatttg
gctttaccagattataaaaaaggttccaccgcccaagaagttttagaaggaattaaatta
gcccatccaattgttgcaaaaatattagattatcgaaaatatcaaaaactgtattcgaca
tatttaaaagggatggaaaaatacatttttaaagatggcaaagtccatactatttataaa
caaacattaacaaacacgggacggttatcctctgtagaacccaatatgcaaaatattagt
attcgtgatgaagttcaacgagaagtccgcaaaatttttactgtttctaacaataataat
attttattatcttgtgattattcccaaattgaattacgaatcctagctcatatgtcgaaa
gatgctgatttaattgtagcctttaaccggggagaagatattcatacgaacacggcaatg
aaaatttttaatttacctaaagaacaaattactccaaatattcgtcggagtgccaaggcc
gttaattttgggattatctatggaattagtgattttgggttagctaatgatttaaatatc
tcggtggcaaaggcaaaagaaattattgctaattattatagtcagtttccaaccattaaa
aaatttattgatacgcaagttgaattttgtaaaaaaaatggctatgtaaagacgattttt
aaccggaaacgttatgttccagaaattaatgatcataattatatgcaacgagaatttggg
aaacgtgttgccatgaacatgccaatccaaggaagcgcagcggatattattaaaattgct
ttaaaaaatattgaccaaaaatttaaagaattacatttgcaatcaaaaataattgcccaa
attcacgatgaactaatttttgaagttgtcaaagatgaattatcccaagtgcaaactatt
gttaaagaactgatggaaaattcaactaaactagatgttaaattaacagttgatatgaaa
actggttatagttgatataaattaaaataa
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