Staphylococcus aureus subsp. aureus 55/2053: SAAG_01205
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Entry
SAAG_01205 CDS
T02810
Name
(GenBank) RNAse R
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
saua
Staphylococcus aureus subsp. aureus 55/2053
Pathway
saua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
saua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SAAG_01205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
saua03019
]
SAAG_01205
03016 Transfer RNA biogenesis [BR:
saua03016
]
SAAG_01205
Enzymes [BR:
saua01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
SAAG_01205
Messenger RNA biogenesis [BR:
saua03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SAAG_01205
Transfer RNA biogenesis [BR:
saua03016
]
Prokaryotic type
tRNA degradation factors
SAAG_01205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
CSD2
OB_RNB
S1
OB_HELZ2
S1CSD-TOTE-2
OB_Dis3
Rho_RNA_bind
RNase_II_C_S1
S1_RRP5
OB_RNR_1st
HemN_C
Motif
Other DBs
NCBI-ProteinID:
EEV04594
LinkDB
All DBs
Position
748284..750656
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AA seq
790 aa
AA seq
DB search
MNLKQSIEEIINQPEYEPMSVSDFQDALGLSSADSFRDLIKVLVELEQSGLIERSKTDRY
QKKHSSKGQSKLIKGTLSQNKKGFAFLRPKDEDMEDIFIPPTKINRALDGDTVIVEIHQS
KGEHKGKIEGEVKSIEKHSVTQVVGTYSEARHFGFVIPDDKRIMQDIFIPKGQSLGAVDG
HKVLVQITKYADGSDNPEGHISAILGHKNDPGVDILSIIYQHGIEIEFPDEVLEEAEAVP
DHIENTEIKGRHDLRDELTITIDGADAKDLDDAISVKKLANGHTQLTVSIADVSYYVTED
SALDKEAYDRATSVYLVDRVIPMIPHRLSNGICSLNPHVDRLTLSCRMEIDASGRVVKHE
IFDSVIHSDYRMTYDAVNQIITEKDPNIREQYKEITPMLDLAQDLSNRLIQMRKRRGEID
FDISEAKVLVNEDGIPTDVQLRQRGEGERLIESFMLIANETVAEHFSKLDVPFIYRVHEQ
PKSDRLRQFFDFITNFGIMIKGTGEDIHPTTLQKVQEEVEGRPEQMVISTMMLRSMQQAH
YDDVNLGHFGLSAEYYTHFTSPIRRYPDLTVHRLIRKYLIEKSMDNKEVKRWEDKLPELA
EHTSKRERRAIESERDTDELKKAEYMIQHIGDEFEGIVSSVANFGMFIELPNTIEGMVHI
ANMTDDYYRFEERQMALIGERQAKVFRIGDTVKVKVTHVDVDERLIDFQIVGMPLPKNDR
SQRPARGKTIQAKTRGKSLDKSKSDDKGHKKKGKQRKGKNQRKNDKSGNSKHKPFYKDKS
VKKKARRKKK
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaaagcaatcaatagaagagattattaatcaacctgaatatgaacctatgtca
gtttcagattttcaagatgcattaggtttaagcagtgccgactcgtttagagatttaatt
aaggtgcttgtggagttagaacaatcaggattaatcgaacgttcgaaaacagatagatac
caaaaaaagcatagttccaaaggtcaatcgaaattgataaaaggaacgttaagtcaaaac
aagaaaggttttgctttcctaagacctaaagatgaggatatggaagatatatttattccc
ccaacaaaaattaatcgtgccttagacggagatactgtaattgtagaaatacatcaatct
aaaggtgaacataaaggtaaaattgaaggggaagttaagtcgattgagaagcattctgta
actcaagttgttggtacgtatagtgaagctagacatttcggctttgttattccagatgat
aaacgtattatgcaagatattttcattcctaaaggtcaaagtttaggtgcagtagatggg
cataaggtactagttcaaattactaagtatgctgatggttcagataatcctgaagggcat
atttcagcaatattaggacataaaaatgatccaggtgtagatattttatctattatttat
caacatggtattgaaattgagtttcctgatgaagtattagaagaagctgaagcagtacct
gatcatattgaaaatactgaaattaaaggccgtcatgatttacgtgatgaattgacaatc
acaattgatggtgcggatgctaaagacttagatgacgcaatcagtgttaaaaagttagcg
aacggtcatacgcaattaactgtaagtattgctgatgtcagttattatgtaacggaagat
tcagctttagataaagaagcttatgatagagcgacaagtgtatatcttgttgaccgtgtg
attccgatgattccacatcgattaagcaatggtatttgttcattaaatcctcacgttgat
cgtttaacgttaagctgtcgcatggaaattgatgcaagtggtcgtgttgttaaacatgaa
atttttgatagtgttatacattctgattatcgaatgacgtatgatgcagttaaccagatt
attactgaaaaggatcctaacattcgcgagcaatataaagaaattacgcctatgttagat
ttagcacaagatttatctaatcgtttgattcaaatgagaaaacgtcgtggtgaaattgat
tttgatattagcgaagcgaaagtactagttaacgaagatggtatacctacagatgttcaa
ttgagacaacgtggtgaaggcgaacgtcttattgagtcatttatgttaattgcaaatgaa
acagttgctgaacattttagtaagttagatgtaccatttatttaccgagtgcatgagcaa
cctaaatcagatcgcttaagacaattctttgattttattactaactttggcattatgatt
aaaggaacaggcgaagatattcatccaacaacacttcaaaaggtccaagaagaagtagaa
ggtcgacctgaacaaatggtcatttcaacaatgatgttacgttcaatgcaacaagcgcat
tatgatgatgtgaacttgggacattttggcttatcagctgaatattatacgcattttaca
tcaccaataagacgttatcctgatttaacagttcatcgtttaatccgtaagtatttaatt
gagaaatcaatggataacaaagaagtgaagcgttgggaagacaaattgcctgagttagct
gaacatacttctaaacgtgaacgtcgtgctattgagtcagaacgtgatactgatgaattg
aaaaaagcagaatatatgattcaacatattggtgatgaatttgaaggtattgtcagctca
gtagctaacttcggtatgttcattgaattgccaaatacgatagaaggtatggttcatatt
gcgaatatgactgatgattattaccgttttgaagagcgtcaaatggcattaattggtgag
cgtcaagctaaagtatttagaattggtgacacagttaaggttaaagtgacgcatgttgat
gtagatgaacgattaattgattttcaaattgtaggtatgcctttaccgaaaaatgatcga
tcacagcgcccagcacgaggtaagacaattcaagctaaaacgcgtggtaaatcattagat
aaatcgaaatctgatgataaaggtcataagaaaaaaggtaagcaacgtaaaggtaaaaac
caacgtaaaaatgacaaatcaggaaacagtaaacataagccattttataaagataaaagt
gtgaaaaagaaagcacgtcgtaagaaaaaataa
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