Staphylococcus aureus subsp. aureus 55/2053: SAAG_02198
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Entry
SAAG_02198 CDS
T02810
Name
(GenBank) ribonuclease J 1
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
saua
Staphylococcus aureus subsp. aureus 55/2053
Pathway
saua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
saua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SAAG_02198
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
saua03019
]
SAAG_02198
Messenger RNA biogenesis [BR:
saua03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SAAG_02198
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
DUF4152
Motif
Other DBs
NCBI-ProteinID:
EEV04249
LinkDB
All DBs
Position
complement(992745..994442)
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AA seq
565 aa
AA seq
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MKQLHPNEVGVYALGGLGEIGKNTYAVEYKDEIVIIDAGIKFPDDNLLGIDYVIPDYTYL
VQNQDKIVGLFITHGHEDHIGGVPFLLKQLNIPIYGGPLALGLIRNKLEEHHLLRTAKLN
EINEDSVIKSKHFTISFYLTTHSIPETYGVIVDTPEGKVVHTGDFKFDFTPVGKPANIAK
MAQLGEEGVLCLLSDSTNSLVPDFTLSEREVGQNVDKIFRNCKGRIIFATFASNIYRVQQ
AVEAAIKNNRKIVTFGRSMENNIKIGMELGYIKAPPETFIEPNKINTVPKHELLILCTGS
QGEPMAALSRIANGTHKQIKIIPEDTVVFSSSPIPGNTKSINRTINSLYKAGADVIHSKI
SNIHTSGHGSQGDQQLMLRLIKPKYFLPIHGEYRMLKAHGETGVECGVEEDNVFIFDIGD
VLALTHDSARKAGRIPSGNVLVDGSGIGDIGNVVIRDRKLLSEEGLVIVVVSIDFNTNKL
LSGPDIISRGFVYMRESGQLIYDAQRKIKTDVISKLNQNKDIQWHQIKSSIIETLQPYLF
EKTARKPMILPVIMKVNEQKESNNK
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaattacatccaaatgaagtaggtgtatatgcacttggaggtctaggtgaaatc
ggtaaaaatacttatgcagttgagtataaagacgaaattgtcattatcgatgcaggtatc
aaattccctgatgataacttattagggattgattatgttatacctgactacacatatcta
gttcaaaaccaagataaaattgttggcctatttataacacatggtcacgaagaccatata
ggcggtgtgcccttcctattaaaacaacttaatatacctatttatggtggtcctttagca
ttaggtttaatccgtaataaacttgaagaacatcatttattacgtactgctaaactaaat
gaaatcaatgaggacagtgtgattaaatctaagcactttacgatttctttctacttaact
acgcatagtattcctgaaacttatggcgtcatcgtagatacacctgaaggaaaagtagtt
cataccggtgactttaaatttgattttacacctgtaggcaaaccagcaaacattgctaaa
atggctcaattaggcgaagaaggcgttctatgtttactttcagactcaacaaattcactt
gtgcctgattttactttaagcgaacgtgaagttggtcaaaacgtagataagatcttccgc
aattgtaaaggtcgtattatatttgctacctttgcttctaatatttaccgagttcaacaa
gcagttgaagctgctatcaaaaataaccgtaaaattgttacgttcggtcgttcgatggaa
aacaatattaaaatcggtatggaacttggttatattaaagcaccacctgaaacatttatt
gaacctaataaaattaatactgtaccgaagcatgagttattaatactatgtactggttct
caaggtgaaccaatggcagcattatctagaattgctaatggtactcataagcaaattaaa
attatacctgaagataccgttgtatttagttcatcacctatcccaggtaatacaaaaagt
attaacagaacgattaattccttgtataaagctggtgcagatgttatccacagcaagatt
tctaacatccatacttcagggcatggttctcaaggtgatcaacaattaatgcttcgatta
atcaagccgaaatatttcttacctattcatggtgaataccgtatgttaaaagcacatggt
gagactggtgttgaatgcggcgttgaagaagataatgtcttcatctttgatatcggagat
gtcttagctttaacacacgattcagcacgtaaagctggtcgcattccatctggtaatgta
cttgttgatggtagtggtatcggtgatatcggtaatgttgtaataagagaccgtaagcta
ttatctgaagaaggtttagttatcgttgttgttagcattgattttaatacaaataaatta
ctttctggtccagatattatttctcgaggatttgtatatatgagagaatcaggacaatta
atttatgatgcacaacgcaaaatcaaaactgatgttattagtaagttaaatcaaaataaa
gatattcaatggcatcagattaaatcttctatcattgaaacattacaaccttatttattt
gaaaaaacagctagaaaaccaatgattttaccagtcattatgaaggtaaacgaacaaaaa
gaatcaaacaataaataa
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