Staphylococcus aureus 08BA02176 (LA-MRSA): C248_0806
Help
Entry
C248_0806 CDS
T02339
Name
(GenBank) putative ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
saub
Staphylococcus aureus 08BA02176 (LA-MRSA)
Pathway
saub03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
saub00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C248_0806
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
saub03019
]
C248_0806
03400 DNA repair and recombination proteins [BR:
saub03400
]
C248_0806
Enzymes [BR:
saub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C248_0806
Messenger RNA biogenesis [BR:
saub03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C248_0806
DNA repair and recombination proteins [BR:
saub03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C248_0806
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RQC
HRDC
RecQ_Zn_bind
ResIII
GH123_cat
DUF1033
Motif
Other DBs
NCBI-ProteinID:
AFR72801
LinkDB
All DBs
Position
811853..813634
Genome browser
AA seq
593 aa
AA seq
DB search
MMQQTLSHYFGYETFRPGQEEIISKVLDHRNVLGVLPTGGGKSICYQVPGLLLGGTTIVI
SPLISLMKDQVDQLKAMGIQAAFLNSSLTQKEQQRIEKALSNGEIQFLYVAPERFENRYF
LNLLQRIKIHLVAFDEAHCISKWGHDFRPSYQNVISKVFTLPQDFTIIALTATATVEVQQ
DIREKLNIAQTDQIKTSTKRRNLIFKVNPTYQRQKFVLDYIKTHDEDAGIIYCSTRKQVE
ELQEALESQKIDSVIYHAGLSNKEREEAQNDFLFDRVKVVVATNAFGMGIDKSNVRFVIH
YNMPGDLESYYQEAGRAGRDGLKSECILLFSERDINLHEYFITVSQADDDYKDKMGEKLT
KMIQYTKTKKCLEATIVHYFEPNEKLEECEQCSNCVQQDKSYNMTQEAKMIISCIARMKQ
QESYSVIIQVLRGESTDYIKYKGYDQISTHGLMKGYTTSELSHLIDELRFKGFLNENDEI
LMCDTSIKKLLSNEVEVFTTPFKQKATEKVFINTVEGVDRVLFSQLVEVRKKLSDKLTIA
PVSIFSDYTLEEFAKRKPASKQDMINIDGVGSYKLKHYCPAFLETIQNYKAKV
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaacaaacattatcgcattactttgggtatgaaacgtttcgaccaggacaagaa
gagattattagcaaagtattagaccatcgtaatgtgcttggtgtcttaccaactggtgga
ggtaagtctatatgctatcaagtaccaggtttattgttaggtggtacaacaattgtaata
agtccactaatatcattaatgaaagatcaagtggatcaattaaaagcgatgggaattcaa
gctgcttttttaaatagtagtttgactcaaaaagagcaacaacgtattgaaaaagcatta
tcaaatggagaaattcaatttttatatgttgcaccagaacgatttgaaaatcgatatttt
ttaaatttgcttcaacgtatcaagattcatttagtggcgtttgatgaagcacattgtatt
tcaaaatggggtcatgatttcagaccgagttaccaaaacgtcatttctaaagtatttacg
ttacctcaagattttacaataatagcgttgacagcaactgcaacagttgaagtacagcaa
gatattagagaaaagttaaatatcgctcaaactgatcaaattaaaacgagtactaagcgt
agaaacttaatttttaaagtaaatcctacttatcaacggcaaaaatttgtattagattat
attaaaacacacgatgaagatgcaggtattatttattgttctacacgtaagcaagttgaa
gagcttcaagaagccttagaaagccagaaaattgatagtgttatatatcatgcaggtttg
agcaataaagaaagagaagaagcgcagaatgacttcttatttgatcgtgttaaagtagtc
gttgctacaaatgcttttggtatgggtattgataaatctaatgtacgttttgttattcat
tataatatgcctggagatttagaatcttattatcaagaagcgggacgtgcaggtcgtgac
ggattgaaaagtgaatgtattttgttatttagcgaacgcgatatcaatttacacgagtat
tttataacagtctctcaagctgatgatgactataaagataaaatgggcgaaaagttaact
aaaatgattcaatatacaaaaacaaaaaaatgtttagaagcaacaattgtccattatttt
gaaccgaatgaaaaattagaagaatgtgaacaatgtagtaattgtgttcaacaagataaa
tcatataatatgacacaagaagctaagatgattattagttgcatcgctcgtatgaaacaa
caagagagttatagtgttatcattcaagtattaagaggagagtcaacagattatattaag
tataaaggttatgatcaaatttcaacccatggtttaatgaaaggttacactacatcagaa
ttaagtcacttaatagatgaattaagattcaaagggttcttaaatgaaaatgatgaaata
ttaatgtgtgatacttcaattaaaaaattactcagtaatgaagtagaagtattcacaaca
ccatttaagcaaaaagcgactgaaaaagtatttataaatacggttgaaggggttgaccga
gtattattcagtcagttggtagaagttcgtaaaaagttaagtgacaaattaacgatagca
cctgtaagtatattttctgattacacgttggaggaatttgctaaacgtaagcctgcttcg
aaacaagatatgattaatattgatggcgtaggtagttacaaattaaaacattattgtcca
gcatttttagaaacgattcaaaattataaagccaaagtatag
DBGET
integrated database retrieval system
