Staphylococcus aureus 08BA02176 (LA-MRSA): C248_1604
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Entry
C248_1604 CDS
T02339
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
saub
Staphylococcus aureus 08BA02176 (LA-MRSA)
Pathway
saub02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
saub00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
C248_1604 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
saub03021
]
C248_1604 (rpoD)
Transcription machinery [BR:
saub03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
C248_1604 (rpoD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
Motif
Other DBs
NCBI-ProteinID:
AFR73594
LinkDB
All DBs
Position
complement(1642190..1643296)
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AA seq
368 aa
AA seq
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MSDNTVKIKKQTIDPTLTLEDVKKQLIEKGKKEGHLSHEEIAEKLQNFDIDSDQMDDFFD
QLNDNDISLVNEKDSSDTDEKLNPSDLSAPPGVKINDPVRMYLKEIGRVNLLSAQEEIEL
AKRIEQGDEVAKSRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLIKAVEKFDFNKG
FKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRQLLQDLGRDPAPEEIG
EEMDLPAEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQEAQSPSDHAAYELLKEQL
EDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRHPSRS
KRLKDFMD
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgtctgataacacagttaaaattaaaaaacaaacaattgatccgacattaacattagaa
gatgttaagaagcaattaattgaaaaaggtaaaaaagagggtcatttaagtcatgaagaa
attgctgaaaaacttcagaatttcgatatcgactctgatcaaatggatgatttctttgat
caattaaatgataatgatatttcactagttaatgaaaaagatagttcagatactgacgag
aaactgaatccaagtgatcttagtgcccctccaggtgttaaaataaatgacccagttcgt
atgtaccttaaagaaattgggcgtgttaacttattaagtgcacaagaagaaatcgaatta
gccaaacgtattgaacaaggtgatgaagtagcaaaatcaagacttgcagaagcgaactta
cgtttagttgtaagtattgctaaaagatacgtaggtcgtggtatgttattccttgattta
atccaagaaggtaatatgggtcttattaaagctgttgaaaaatttgactttaacaaagga
tttaagttttcaacatatgcaacatggtggattagacaagcaatcactcgtgcaattgct
gaccaagcacgtacgattcgtatccctgtgcatatggtagaaacaattaataaattaatt
cgtgttcaacgtcaattattacaggacttaggtcgagatccagcaccagaagagattggt
gaagaaatggatttaccagcagaaaaagttcgtgaaattttaaaaattgcgcaagaacct
gtttcattagaaacaccaattggtgaagaagatgatagtcatttaggagactttattgag
gatcaggaagcacaaagtccttcagatcatgctgcttatgaattattaaaagagcaatta
gaagatgtgcttgatacattaactgatagagaagaaaatgtattacgattaagatttggt
cttgatgacggcagaacaagaacacttgaagaagttggtaaagttttcggtgttacacgt
gaacgtattcgacaaatcgaagcaaaagcacttagaaaattaagacatccaagtcgtagt
aaacgtttgaaagactttatggattaa
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