Staphylococcus aureus CA-347 (MRSA): CA347_1004
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Entry
CA347_1004 CDS
T02702
Symbol
rnjA
Name
(GenBank) ribonuclease J 1
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
sauc
Staphylococcus aureus CA-347 (MRSA)
Pathway
sauc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sauc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CA347_1004 (rnjA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sauc03019
]
CA347_1004 (rnjA)
Messenger RNA biogenesis [BR:
sauc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CA347_1004 (rnjA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
DUF4152
Motif
Other DBs
NCBI-ProteinID:
AGO29358
LinkDB
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Position
complement(1067182..1068879)
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AA seq
565 aa
AA seq
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MKQLHPNEVGVYALGGLGEIGKNTYAVEYKDEIVIIDAGIKFPDDNLLGIDYVIPDYTYL
VQNQDKIVGLFITHGHEDHIGGVPFLLKQLNIPIYGGPLALGLIRNKLEEHHLLRTAKLN
EINEDSVIKSKHFTISFYLTTHSIPETYGVIVDTPEGKVVHTGDFKFDFTPVGKPANIAK
MAQLGEEGVLCLLSDSTNSLVPDFTLSEREVGQNVDKIFRNCKGRIIFATFASNIYRVQQ
AVEAAIKNNRKIVTFGRSMENNIKIGMELGYIKAPPETFIEPNKINTVPKHELLILCTGS
QGEPMAALSRIANGTHKQIKIIPEDTVVFSSSPIPGNTKSINRTINSLYKAGADVIHSKI
SNIHTSGHGSQGDQQLMLRLIKPKYFLPIHGEYRMLKAHGETGVECGVEEDNVFIFDIGD
VLALTHDSARKAGRIPSGNVLVDGSGIGDIGNVVIRDRKLLSEEGLVIVVVSIDFNTNKL
LSGPDIISRGFVYMRESGQLIYDAQRKIKTDVISKLNQNKDIQWHQIKSSIIETLQPYLF
EKTARKPMILPVIMKVNEQKESNNK
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaattacatccaaatgaagtaggtgtatatgcacttggaggtctaggtgaaatc
ggtaaaaatacttatgcagttgagtataaagacgaaattgtcattatcgatgcaggtatc
aaattccctgatgataacttattagggattgattatgttatacctgactacacatatcta
gttcaaaaccaagataaaattgttggcctatttataacacatggtcacgaagaccatata
ggcggtgtgcccttcctattaaaacaacttaatatacctatttatggtggtcctttagca
ttaggtttaatccgtaataaacttgaagaacatcatttattacgtactgctaaactaaat
gaaatcaatgaggacagtgtgattaaatctaagcactttacgatttctttctacttaact
acgcatagtattcctgaaacttatggcgtcatcgtagatacacctgaaggaaaagtagtt
cataccggtgactttaaatttgattttacacctgtaggcaaaccagcaaacattgctaaa
atggctcaattaggcgaagaaggcgttctatgtttactttcagactcaacaaattcactt
gtgcctgattttactttaagcgaacgtgaagttggtcaaaacgtagataagatcttccgt
aattgtaaaggtcgtattatattcgctaccttcgcttctaatatttaccgagttcaacaa
gcagttgaagctgctatcaaaaataaccgtaaaattgttacgttcggtcgttcgatggaa
aacaatattaaaatcggtatggaacttggttatattaaagcaccacctgaaacatttatt
gaacctaataaaattaataccgtaccgaagcatgagttattgatactatgtactggttct
caaggtgaaccaatggcagcattatctagaattgctaatggtacgcataagcaaattaaa
attatacctgaagataccgttgtatttagttcatcacctatcccaggtaatacaaaaagt
attaacagaacgattaattccttgtataaagctggtgcagatgttatccacagcaagatt
tctaacatccatacttcagggcatggttctcaaggtgatcaacaattaatgcttcgatta
atcaagccgaaatatttcttaccaattcatggtgaataccgtatgttaaaagcacatggt
gagactggtgttgaatgcggcgttgaagaagataatgtcttcatctttgatatcggagat
gtcttagctttaacacacgattcagcacgtaaagctggtcgcattccatctggtaatgta
cttgttgatggtagtggtatcggtgatattggtaatgttgtaataagagaccgtaagcta
ttatctgaagaaggtttagttatcgttgttgttagtattgattttaatacaaataaatta
ctttctggtccagacattatttctcgaggatttgtatatatgagagaatcaggacaatta
atttatgatgcacaacgcaaaatcaaaactgatgttattagtaagttaaatcaaaataaa
gatattcaatggcatcagattaaatcttctatcattgaaacattacaaccttatttattt
gaaaaaacagctagaaaaccaatgattttaccagtcattatgaaggtaaatgaacaaaaa
gaatcaaacaataaataa
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