Staphylococcus aureus CA-347 (MRSA): CA347_2161
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Entry
CA347_2161 CDS
T02702
Name
(GenBank) helicase conserved C-terminal domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
sauc
Staphylococcus aureus CA-347 (MRSA)
Pathway
sauc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sauc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CA347_2161
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sauc03019
]
CA347_2161
03009 Ribosome biogenesis [BR:
sauc03009
]
CA347_2161
Enzymes [BR:
sauc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CA347_2161
Messenger RNA biogenesis [BR:
sauc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CA347_2161
Ribosome biogenesis [BR:
sauc03009
]
Prokaryotic type
rRNA helicases
CA347_2161
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
DeaD_dimer
Cas3-like_C_2
AAA_30
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
AGO30463
LinkDB
All DBs
Position
complement(2193823..2195343)
Genome browser
AA seq
506 aa
AA seq
DB search
MQNFKELGISDNTVQSLESMGFKEPTPIQKDSIPYALQGIDILGQAQTGTGKTGAFGIPL
IEKVVGKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQVVTVFGGMPIERQIKALKKGP
QIVVGTPGRVIDHLNRRTLKTDGIHTLILDEADEMMNMGFIDDMRFIMDKIPAAQRQTML
FSATMPKAIQALVQQFMKSPKIIKTMNNEMSDPQIEEFYTIVKELEKFDTFTNFLDVHQP
ELAIVFGRTKRRVDELTSALISKGYKAEGLHGDITQAKRLEVLKKFKNDQINILVATDVA
ARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFVNPIEMDYIRQIEDANG
RKMSALRPPHRKEVLQAREDDIKEKVENWMSKESESRLKRISTELLNEYNDVDLVAALLQ
ELVEANDEVEVQLTFEKPLSRKGRNGKPSGSRNRNSKRGNPKFDGKSKRSKGYSNKKKST
KKFDRKEKSSGGSRPMKGRTFADHQK
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaaattttaaagaactagggatttcggataatacggttcagtcacttgaatcaatg
ggatttaaagagccgacacctatccaaaaagacagtatcccttatgcgttacaaggaatt
gatatccttgggcaagctcaaaccggtacaggtaaaacaggagcattcggtattccttta
attgagaaagtagtagggaaacaaggggttcaatcgttgattttagcacctacaagagaa
ttggcaatgcaggtagctgaacaattaagagaatttagccgtggacaaggtgtccaagtt
gttactgtattcggtggtatgcctatcgaacgccaaattaaagccttgaaaaaaggccca
caaatcgtagtcggaacacctgggcgtgttatcgaccatttaaatcgtcgcacattaaaa
acggacggaattcatactttgattttagatgaagctgatgaaatgatgaatatgggattc
atcgatgatatgagatttattatggataaaattccagcagcacaacgtcaaacaatgttg
ttctcagctacaatgcctaaagcaatccaagctttagtacaacaatttatgaaatcacca
aaaatcattaagacaatgaataatgaaatgtctgatccacaaatcgaagaattctataca
attgttaaagaattagagaaatttgatacatttacaaatttcctagatgttcatcaacca
gaattagcaatcgtatttggacgtacaaaacgtcgtgttgatgagttaacaagtgctttg
atttctaaaggatataaagctgaaggattacatggtgatatcacacaagcgaaacgttta
gaagtattaaagaaatttaaaaatgaccaaattaatattttagtcgctactgatgtagca
gcaagaggactagatatttctggtgtaagtcatgtttataactttgatattcctcaagac
actgaaagctacacacaccgtattggtcgtactggccgtgctggtaaagaaggtatcgcg
gttacttttgtaaatccaatcgagatggattacattagacaaattgaagatgctaacggt
agaaagatgagtgcattacgtccaccacatcgcaaagaagtacttcaagcacgtgaagat
gatattaaagaaaaagttgaaaactggatgtctaaagagtcagaatcacgcttgaaacgc
atttctacagagttgttaaatgaatataacgatgttgatttagttgctgcacttttacaa
gagttagtagaagcgaacgatgaagttgaagttcaattaacttttgaaaaaccattatct
cgtaaaggtcgtaacggtaaaccaagtggttctcgtaacagaaatagtaagcgtggtaat
cctaaatttgacggtaagagtaaacgttcaaaaggatactcaaataagaagaaaagtaca
aaaaaattcgaccgtaaagagaagagcagcggtggaagcagacctatgaaaggtcgcaca
tttgctgaccatcaaaaataa
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