Staphylococcus aureus CA-347 (MRSA): CA347_559
Help
Entry
CA347_559 CDS
T02702
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
sauc
Staphylococcus aureus CA-347 (MRSA)
Pathway
sauc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sauc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CA347_559 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sauc03021
]
CA347_559 (rpoC)
03400 DNA repair and recombination proteins [BR:
sauc03400
]
CA347_559 (rpoC)
Enzymes [BR:
sauc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CA347_559 (rpoC)
Transcription machinery [BR:
sauc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CA347_559 (rpoC)
DNA repair and recombination proteins [BR:
sauc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CA347_559 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
AGO28917
LinkDB
All DBs
Position
593976..597599
Genome browser
AA seq
1207 aa
AA seq
DB search
MIDVNNFHYMKIGLASPEKIRSWSFGEVKKPETINYRTLKPEKDGLFCERIFGPTKDWEC
SCGKYKRVRYKGMVCDRCGVEVTKSKVRRERMGHIELAAPVSHIWYFKGIPSRMGLLLDM
SPRALEEVIYFASYVVVDPGPTGLEKKTLLSEAEFRDYYDKYPGQFVAKMGAEGIKNLLE
EIDLDEELKLLRDELESATGQRLTRAIKRLEVVESFRNSGNKPSWMILDVLPIIPPEIRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPGIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIAVGPSLKMYQCGLPKE
MALELFKPFVMKELVQREIATNIKNAKSKIERMDDEVWDVLEEVIREHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVTTAYNADFDGDQMAVHVPLSKEAQAEARMLMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLERKDAVNTGAIFNNTNEVLKAYANGFVHLHTRIGVH
ASSFNNPTFTEEQNKKILATSVGKIIFNEIIPDSFAYINEPTQENLERKTPNRYFIDPTT
LGEGGLKEYFENEELIEPFNKKFLGNIIAEVFNRFSITDTSMMLDRMKDLGFKFSSKAGI
TVGVADIVVLPDKQQILDEHEKLVDRITKQFNRGLITEEERYNAVVEIWTDAKDQIQGEL
MQSLDKTNPIFMMSDSGARGNASNFTQLAGMRGLMAAPSGKIIELPITSSFREGLTVLEY
FISTHGARKGLADTALKTADSGYLTRRLVDVAQDVIVREEDCGTDRGLLVSDIKEGTEMI
EPFIERIEGRYSKETIRHPETDEIIIRPDELITPEIAKKITDAGIEQMYIRSAFTCNARH
GVCEKCYGKNLATGEKVEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVAGSDITQGLPRI
QEIFEARNPKGQAVITEIEGVVEDIKLAKDRQQEIVVKGANETRSYLASGTSRIIVEIGQ
PVQRGEVLTEGSIEPKNYLSVAGLNATESYLLKEVQKVYRMQGVEIDDKHVEVMVRQMLR
KVRIIEAGDTKLLPGSLVDIHNFTDANREAFKHRKRPATAKPVLLGITKASLETESFLSA
ASFQETTRVLTDAAIKGKRDDLLGLKENVIIGKLIPAGTGMRRYSDVKYEKTAKPVAEVE
SQTEVTE
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
ttgattgatgtaaataatttccattatatgaaaataggattggcttcacctgaaaaaatc
cgttcttggtcttttggtgaagttaaaaaacctgaaacaatcaactaccgtacattaaaa
cctgaaaaagatggtctattctgtgaaagaattttcggacctacaaaagactgggaatgt
agttgtggtaaatacaaacgtgttcgctacaaaggcatggtctgtgacagatgtggagtt
gaagtaactaaatctaaagtacgtcgtgaaagaatgggtcacattgaacttgctgctcca
gtttctcacatttggtatttcaaaggtataccaagtcgtatgggattattacttgacatg
tcaccaagagcattagaagaagttatttacttcgcttcttatgttgttgtagatccaggt
ccaactggtttagaaaagaaaactttattatctgaagctgaattcagagattattatgat
aaatacccaggtcaattcgttgcaaaaatgggtgcagaaggtattaaaaatttacttgaa
gagattgatcttgacgaagaacttaaattgttacgtgatgagttggaatcagctactggt
caaagacttactcgtgcaattaaacgtttagaagttgttgaatcattccgtaattcaggt
aacaaaccttcatggatgattttagatgtacttccaatcatcccaccagaaattcgtcca
atggttcaattagatggtggacgatttgcaacaagtgacttaaacgacttataccgtcgt
gtaattaatcgaaataatcgtttaaaacgtttattagatttaggtgcacctggtatcatc
gttcaaaacgaaaaacgtatgttacaagaagccgttgacgctttaattgataatggtcgt
cgtggtcgtccagttactggcccaggtaaccgtccattaaaatctttatcacatatgtta
aaaggtaaacaaggtcgtttccgtcaaaacttacttggtaaacgtgttgactattcagga
cgttcagttatcgcggtaggtccaagcttgaaaatgtatcaatgtggtttgccaaaagaa
atggcacttgaactatttaaaccattcgtaatgaaagaattagttcaacgtgaaattgca
actaacattaaaaatgcgaagagtaaaatcgaacgcatggatgatgaagtttgggacgta
ttggaagaagtaattagagaacatcctgtattacttaaccgtgcaccaacacttcataga
cttggtattcaagcatttgaaccaactttagttgaaggtcgtgcgattcgtttacatcca
cttgtaacaacagcttataacgctgactttgatggtgaccaaatggcggttcacgttcct
ttatcaaaagaggcacaagctgaagcaagaatgttgatgttagcagcacaaaacatcttg
aaccctaaagatggtaaaccagtagttacaccatcacaagatatggtacttggtaactat
taccttactttagaaagaaaagatgcagtaaatacaggcgcaatctttaataatacaaat
gaagtattaaaagcatatgcaaatggctttgtacatttacacacaagaattggtgtacat
gcaagttcattcaacaatccaacatttactgaagaacaaaacaaaaagattcttgctacg
tcagtaggtaaaattatatttaatgaaatcattccagattcatttgcttatattaatgaa
cctacgcaagaaaacttagaaagaaagacaccaaacagatatttcatcgatcctacaact
ttaggtgaaggtggattaaaagaatactttgaaaatgaagaattaattgaacctttcaac
aaaaaattcttaggtaatattattgcagaagtattcaacagatttagcatcactgataca
tcaatgatgttagaccgtatgaaagacttaggattcaaattctcatctaaagctggtatt
acagtaggtgttgctgatatcgtagtattacctgataagcaacaaatacttgatgagcat
gaaaaattagtcgacagaattacaaaacaattcaatcgtggtttaatcactgaagaagaa
agatataatgcagttgttgaaatttggacagatgcaaaagatcaaattcaaggtgaattg
atgcaatcacttgataaaactaacccaatctttatgatgagtgattcaggtgcccgtggt
aacgcatctaactttacacagttagcaggtatgcgtggattgatggccgcaccatctggt
aagattatcgaattaccaatcacatcttcattccgtgaaggtttaacagtacttgaatac
ttcatctcaactcacggtgcacgtaaaggtcttgccgatacagcacttaaaacagctgac
tcaggatatcttactcgtcgtcttgttgacgtggcacaagatgttattgttcgtgaagaa
gactgtggtactgatagaggtttattagtttctgatattaaagaaggtacagaaatgatt
gaaccatttatcgaacgtattgaaggtcgttattctaaagaaacaattcgtcatcctgaa
actgatgaaataatcattcgtcctgatgaattaattacacctgaaattgctaagaaaatt
acagatgctggtattgaacaaatgtatattcgctcagcatttacttgtaacgcacgccat
ggtgtttgtgaaaaatgttacggtaaaaaccttgctactggtgaaaaagttgaagttggt
gaagcagttggtacaattgcagcccaatctatcggtgaaccaggtacacagcttacaatg
cgtacattccatacaggtggggtagcaggtagcgatatcacacaaggtcttcctcgtatt
caagagattttcgaagcacgtaaccctaaaggtcaagcggtaattactgaaatcgaaggt
gtcgtagaagatattaaattagcaaaagatagacaacaagaaatcgttgttaaaggtgct
aatgaaacaagatcataccttgcttcaggtacttcaagaattattgtagaaataggtcaa
ccagttcaacgtggtgaagtattaactgaaggttctattgaacctaagaattacttatca
gttgctggattaaacgcgacagaaagctacttattaaaagaagtacaaaaagtttatcgt
atgcaaggggtagaaatcgacgataaacacgttgaggttatggttcgacaaatgttacgt
aaagttagaattatcgaagcaggtgatacgaagttattaccaggttcattagttgatatt
cataactttacagatgcaaatagagaagcatttaaacaccgtaagcgtcctgcaacagct
aaaccagtattacttggtattactaaagcatcacttgaaacagaaagtttcttatctgca
gcatcattccaagaaacaacaagagttcttacagatgcagcaattaaaggtaagcgtgat
gacttattaggtcttaaagaaaacgtaattattggtaagttaattccagctggtactggt
atgagacgttatagcgacgtaaaatacgaaaaaacagctaaaccagttgcagaagttgaa
tctcaaactgaagtaacggaataa
DBGET
integrated database retrieval system
