Staphylococcus aureus subsp. aureus FDAARGOS_5: X998_1087
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Entry
X998_1087 CDS
T03492
Name
(GenBank) ribonuclease J 1
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
sauf
Staphylococcus aureus subsp. aureus FDAARGOS_5
Pathway
sauf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sauf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
X998_1087
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sauf03019
]
X998_1087
Messenger RNA biogenesis [BR:
sauf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
X998_1087
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
DUF4152
Motif
Other DBs
NCBI-ProteinID:
AHW66503
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Position
1274859..1276556
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AA seq
565 aa
AA seq
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MKQLHPNEVGVYALGGLGEIGKNTYAVEYKDEIVIIDAGIKFPDDNLLGIDYVIPDYTYL
VQNQDKIVGLFITHGHEDHIGGVPFLLKQLNIPIYGGPLALGLIRNKLEEHHLLRTAKLN
EINEDSVIKSKHFTISFYLTTHSIPETYGVIVDTPEGKVVHTGDFKFDFTPVGKPANIAK
MAQLGEEGVLCLLSDSTNSLVPDFTLSEREVGQNVDKIFRNCKGRIIFATFASNIYRVQQ
AVEAAIKNNRKIVTFGRSMENNIKIGMELGYIKAPPETFIEPNKINTVPKHELLILCTGS
QGEPMAALSRIANGTHKQIKIIPEDTVVFSSSPIPGNTKSINRTINSLYKAGADVIHSKI
SNIHTSGHGSQGDQQLMLRLIKPKYFLPIHGEYRMLKAHGETGVECGVEEDNVFIFDIGD
VLALTHDSARKAGRIPSGNVLVDGSGIGDIGNVVIRDRKLLSEEGLVIVVVSIDFNTNKL
LSGPDIISRGFVYMRESGQLIYDAQRKIKTDVISKLNQNKDIQWHQIKSSIIETLQPYLF
EKTARKPMILPVIMKVNEQKESNNK
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaattacatccaaatgaagtaggtgtatatgcacttggaggtctaggtgaaatc
ggtaaaaatacttatgcagttgagtataaagacgaaattgtcattatcgatgcaggtatc
aaattccctgatgataacttattagggattgattatgttatacctgactacacatatcta
gttcaaaaccaagataaaattgttggcctatttataacacatggtcacgaagaccatata
ggcggtgtgcccttcctattaaaacaacttaatatacctatttatggtggtcctttagca
ttaggtttaatccgtaataaacttgaagaacatcatttattacgtactgctaaactaaat
gaaatcaatgaggacagtgtgattaaatctaagcactttacgatttctttctacttaact
acacatagtattcctgaaacttatggcgtcatcgtagatacacctgaaggaaaagtagtt
cataccggtgactttaaatttgattttacacctgtaggcaaaccagcaaacattgctaaa
atggctcaattaggcgaagaaggcgttctatgtttactttcagactcaacaaattcactt
gtgcctgattttactttaagcgaacgtgaagttggtcaaaacgtagataagatcttccgt
aattgtaaaggtcgtattatatttgctaccttcgcttctaatatttaccgagttcaacaa
gcagttgaagctgctatcaaaaataaccgtaaaattgttacgttcggtcgttcgatggaa
aacaatattaaaataggtatggaacttggttatattaaagcaccacctgaaacatttatt
gaacctaataaaattaataccgtaccgaagcatgagttattgatactatgtactggttca
caaggtgaaccaatggcagcattatctagaattgctaatggtactcataagcaaattaaa
attatacctgaagataccgttgtatttagttcatcacctatcccaggtaatacaaaaagt
attaacagaactattaattccttgtataaagctggtgcagatgttatccatagcaagatt
tctaacatccatacttcagggcatggttctcaaggtgatcaacaattaatgcttcgatta
atcaagccgaaatatttcttacctattcatggtgaataccgtatgttaaaagcacatggt
gagactggtgttgaatgcggcgttgaagaagataatgtcttcatctttgatattggagat
gtcttagctttaacacacgattcagcacgtaaagctggtcgcattccatctggtaatgta
cttgttgatggtagtggtatcggtgatatcggtaatgttgtaataagagaccgtaagcta
ttatctgaagaaggtttagttatcgttgttgttagtattgattttaatacaaataaatta
ctttctggtccagacattatttctcgaggatttgtatatatgagggaatcaggtcaatta
atttatgatgcacaacgcaaaatcaaaactgatgttattagtaagttaaatcaaaataaa
gatattcaatggcatcagattaaatcttctatcattgaaacattacaaccttatttattt
gaaaaaacagctagaaaaccaatgattttaccagtcattatgaaggtaaacgaacaaaaa
gaatcaaacaataaataa
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