Staphylococcus aureus subsp. aureus FDAARGOS_5: X998_1277
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Entry
X998_1277 CDS
T03492
Name
(GenBank) ribonuclease J 2
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
sauf
Staphylococcus aureus subsp. aureus FDAARGOS_5
Pathway
sauf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sauf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
X998_1277
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sauf03019
]
X998_1277
Messenger RNA biogenesis [BR:
sauf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
X998_1277
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
vATP-synt_E
HTH_10
Imm49
Motif
Other DBs
NCBI-ProteinID:
AHW67567
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All DBs
Position
complement(1074647..1076320)
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AA seq
557 aa
AA seq
DB search
MSLIKKKNKDIRIIPLGGVGEIAKNMYIVEVDDEMFMLDAGLMFPEDEMLGIDIVIPDIS
YVLENKDKLKGIFLTHGHEHAIGAVSYVLEQLDAPVYGSKLTIALIKENMKARNIDKKVR
YYTVNNDSIMRFKNVNISFFNTTHSIPDSLGVCIHTSYGAIVYTGEFKFDQSLHGHYAPD
IKRMAEIGEEGVFVLISDSTEAEKPGYNTPENVIEHHMYDAFAKVRGRLIVSCYASNFIR
IQQVLNIASKLNRKVSFLGRSLESSFNIARKMGYFDIPKDLLIPITEVDNYPKNEVIIIA
TGMQGEPVEALSQMAQHKHKIMNIEEGDSVFLAITASANMEVIIANTLNELVRAGAHIIP
NNKKIHASSHGCMEELKMMINIMKPEYFIPVQGEFKMQIAHAKLAAEAGVAPEKIFLVEK
GDVINYNGKDMILNEKVNSGNILIDGIGIGDVGNIVLRDRHLLAEDGIFIAVVTLDPKNR
RIAAGPEIQSRGFVYVRESEDLLREAEEKVREIVEAGLQEKRIEWSEIKQNMRDQISKLL
FESTKRRPMIIPVISEI
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
ttgagtttaataaagaaaaagaataaagatattcgcattataccattaggcggtgttggc
gaaattgctaaaaatatgtatatcgttgaagtagacgatgaaatgtttatgttagatgct
ggacttatgtttccagaagacgaaatgctaggtattgatattgttataccagacatttca
tacgtacttgaaaataaagataaattgaagggtatattccttacacacggacatgagcac
gcgattggtgcagtgagttatgttttagaacaattagatgcaccagtatatggatctaaa
ttgacaatagcgttaattaaagaaaatatgaaagcccgtaatattgataaaaaagttcgc
tactatacagttaataatgattcaattatgagattcaaaaacgtgaatattagtttcttt
aatacgacacacagtattcctgatagtttaggtgtttgtattcacacttcatatggtgcc
attgtgtatacaggtgaatttaagtttgaccaaagtttacatggacattatgcaccagat
attaaacgtatggcagagattggtgaagaaggcgtatttgtcttaatcagtgattctact
gaggcagagaaacctggatataatactccggaaaatgtgattgaacatcatatgtatgat
gcttttgcaaaagtgcgaggtcgcttgatagtttcatgttatgcttcgaactttatacgt
attcagcaagttttaaatattgctagcaagctaaatcgtaaagtgtcatttttaggaaga
tcacttgaaagttcatttaatattgctcgtaaaatggggtatttcgacattcctaaagat
ttgctaattcctataacagaagttgataattatcctaaaaatgaagtgataattatagct
actggtatgcaaggagaacctgtagaagccttaagtcaaatggcgcaacataagcataaa
attatgaatatcgaagaaggcgattctgtatttttagcaattacggcttctgctaatatg
gaagttatcattgcgaatacattaaatgagcttgtacgtgctggcgcacatattattcca
aataacaaaaagattcatgcttcaagtcatggttgcatggaagaattaaaaatgatgatt
aatattatgaaacctgaatactttattcctgtacaaggtgaatttaaaatgcagatagca
catgcgaagctagcagctgaagcaggtgttgcaccagaaaagattttccttgtggaaaaa
ggagatgtcattaattacaacggtaaagatatgatattaaatgaaaaggtaaattcagga
aatattttaatagatggcattggtattggggatgtaggaaatatcgtgttgagagaccgt
catcttttagcagaagatggtatctttattgctgttgtaacgttagatcctaaaaataga
cgtatagctgcgggacctgaaattcaatctcgtgggtttgtatatgtacgtgaaagtgaa
gacttattacgtgaagcagaagagaaagtacgtgaaatagtagaggctggtttacaagaa
aaacgcatagaatggtctgaaattaaacaaaatatgcgtgatcaaattagtaaactatta
ttcgaaagtacaaaacgtcgtcctatgattattccagtaatttctgaaatttaa
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