Streptomyces auratus: SU9_013125
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Entry
SU9_013125 CDS
T07630
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
sauh
Streptomyces auratus
Brite
KEGG Orthology (KO) [BR:
sauh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sauh03021
]
SU9_013125
Transcription machinery [BR:
sauh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SU9_013125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
HTH_23
HTH_Crp_2
MarR_2
HTH_3
Sigma70_ECF
HTH_24
DUF7343
MarR
Apolipoprotein
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
QTZ92301
UniProt:
J1RMB1
LinkDB
All DBs
Position
3106121..3107059
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AA seq
312 aa
AA seq
DB search
MSPRLDELRTDDHRQPASSTPPSDPTGLIPSQLLPAESDLAEETEIDALPEIPPFDEVGP
VDARALSKTLFERLENLEEGTHEFAYVRNTLVELNLALVKFAASRFRSRSEPMEDIVQVG
TIGLIKAIDRFELSRGVEFPTFAMPTIIGEIKRFFRDTSWSVRVPRRLQELRLDLAKAGD
ELAQKLDRAPTVHELAARLDISRDEVVEGMAASNAYTASSLDAQPEEDDSEGALADRIGY
EDHGLEGIEYVESLKPLIAELPPRDRKILSLRFVANMTQSEIGEELGISQMHVSRLLSRT
LGRLRKGLMIDE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccccggctcgacgaattgcgtaccgacgaccaccggcagcccgcttcgtcgaca
cccccgtccgacccgaccgggcttatcccttcccagctgctccctgccgaatcagacctg
gcagaagagactgagatcgacgctctgcccgagatcccgccgttcgacgaggtggggccg
gtggacgcgagggctctgtccaagaccctcttcgagcggctcgagaacctcgaagaaggc
acccacgaattcgcgtacgtccgtaacacgctggtcgagctcaatctcgccctggtgaag
ttcgcggcctcccggttccgttcccgcagcgagcccatggaggacatcgtccaggtcggc
acgatcggcctgatcaaggcgatcgaccgcttcgaactcagccgtggcgtcgagttcccg
acgttcgcgatgccgaccatcatcggcgagatcaagcgtttcttccgcgacaccagctgg
tcggtgcgcgtaccgaggcggctgcaggaactgcggctggacctcgccaaggcgggcgac
gagctggcgcagaagctggaccgcgcgcccacggtgcacgaactcgccgcgcgcctcgac
atcagccgtgacgaggtcgtcgagggcatggccgcgagcaacgcgtacaccgcgagctcg
ctggacgcccagcccgaggaggacgacagcgaaggcgcgctggccgaccgcatcggctac
gaggaccacggcctcgaaggcatcgagtacgtggaatccctcaagccgctgatcgccgaa
ctcccgccgcgcgaccggaagatcctctcgctgcgcttcgtcgccaacatgacgcagtcc
gagatcggcgaggagctgggcatctcccagatgcacgtctcccgtctgctctcgcgcacc
ctcggacggctccgcaagggtctgatgatcgacgagtga
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