Streptomyces auratus: SU9_015435
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Entry
SU9_015435 CDS
T07630
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
sauh
Streptomyces auratus
Brite
KEGG Orthology (KO) [BR:
sauh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sauh03016
]
SU9_015435
Enzymes [BR:
sauh01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
SU9_015435
Transfer RNA biogenesis [BR:
sauh03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
SU9_015435
Prokaryotic type
tRNA splicing ligases
SU9_015435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
QTZ92701
UniProt:
J1ZW28
LinkDB
All DBs
Position
complement(3612451..3613644)
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AA seq
397 aa
AA seq
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MSYVEVPGAQVPIRMWTDPAGVEDVAMQQLRNVATLPWIKGLAVMPDVHYGKGATVGSVI
AMRGAVCPAAVGVDIGCGMSAVKTSLTANDLPGDLSRFRSKIEQAIPVGRGMHDDPVDLG
RLHGFPTSGWEDFWARFGGVAEAVRFRQERATKQMGSLGSGNHFIEFCLDDDGAVWLMLH
SGSRNIGKELAEFHMGQAQKLPHNQGLIDRDLAVFIADTPQMAAYRNDLFWAQEYAKYNR
AVMMALFQDVVRKEFKKARPVFEPVISCHHNYVAEERYDGMDLLVTRKGAIRAGSGEFGI
IPGSMGTGSYIVKGLGNAASFQSASHGAGRKMSRNAAKKRFSTRDLMEQTRGVECRKDSG
VIDEIPGAYKPIEKVMEQQRDLVEVVAHLKQVVCVKG
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgtcctacgtcgaggtgcctggtgcccaggttccgatccggatgtggacggacccggcc
ggggtcgaggacgtagccatgcagcagctgcgcaacgtcgccaccctgccgtggatcaag
ggcctggccgtgatgccggatgtgcactacggcaagggcgccacggtcggttcggtgatc
gccatgcgcggcgcggtctgcccggcggcggtcggtgtcgacatcggctgcggcatgagc
gcggtgaagacctcgctcaccgccaatgacctgcccggcgatctgtcccggttccgctcg
aagatcgagcaggccattccggtgggccgggggatgcatgacgacccggtcgacctcgga
cggctgcacggcttcccgacgtcggggtgggaggacttctgggcgcggttcgggggcgtc
gccgaggcggtcaggttccggcaggagcgggcgaccaagcagatggggtcgctcgggagc
ggcaaccacttcatcgagttctgcctcgatgacgacggtgcggtgtggctgatgctgcac
tccggctcccggaacatcggcaaggagctcgccgagttccacatggggcaggcgcagaag
ctgccgcacaaccagggcctgatcgaccgcgatctcgccgtcttcatcgcggacaccccg
cagatggcggcgtaccgcaacgacctgttctgggcgcaggagtacgccaagtacaaccgg
gccgtgatgatggcgctgttccaggacgtggtccgcaaggagttcaagaaggccaggccg
gtattcgagccggtgatctcctgccaccacaactatgtggcggaggagcgttacgacggc
atggacctgctggtgacccgtaagggcgcgatccgggcgggcagcggcgagttcggcatc
atcccgggctcgatgggcaccggctcgtacatcgtcaagggcctggggaacgccgcgagc
ttccagtccgcctcccacggcgccggccgcaagatgagccggaacgccgcgaagaagcgg
ttctccacgcgggacctgatggagcagacgcggggtgtggagtgccgtaaggactccggg
gtgatcgacgagatccccggcgcctacaagccgatcgagaaggtcatggagcagcagcgg
gacctggtcgaggtcgttgctcatctcaagcaggtggtgtgtgtgaaggggtga
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