Staphylococcus aureus USA300-ISMMS1 (MRSA): AZ30_03750
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Entry
AZ30_03750 CDS
T03115
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
saui
Staphylococcus aureus USA300-ISMMS1 (MRSA)
Pathway
saui03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
saui00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AZ30_03750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
saui03019
]
AZ30_03750
03400 DNA repair and recombination proteins [BR:
saui03400
]
AZ30_03750
Enzymes [BR:
saui01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AZ30_03750
Messenger RNA biogenesis [BR:
saui03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AZ30_03750
DNA repair and recombination proteins [BR:
saui03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AZ30_03750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RQC
HRDC
RecQ_Zn_bind
ResIII
GH123_cat
DUF1033
Motif
Other DBs
NCBI-ProteinID:
AHJ06532
LinkDB
All DBs
Position
801077..802855
Genome browser
AA seq
592 aa
AA seq
DB search
MQQTLSHYFGYETFRPGQEEIISKVLDHRNVLGVLPTGGGKSICYQVPGLLLGGTTIVIS
PLISLMKDQVDQLKAMGIQAAFLNSSLTQKEQQRIEKALSNGEIQFLYVAPERFENRYFL
NMLQRIKIHLVAFDEAHCISKWGHDFRPSYQNVISKVFTLPQDFTIIALTATATVEVQQD
IREKLNIAQTDQIKTSTKRRNLIFKVNPTYQRQKFILDYIKTHDEDAGIIYCSTRKQVEE
LQEALESQKIESVIYHAGLSNKEREEAQNDFLFDRVKVVVATNAFGMGIDKSNVRFVIHY
NMPGDLESYYQEAGRAGRDGLKSECILLFSERDINLHEYFITVSQADDDYKDKMGEKLTK
MIQYTKTKKCLEATIVHYFEPNEKLEECEQCSNCVQQDKSYNMTQEAKMIISCIARMKQQ
ESYSVIIQVLRGESTDYIKYKGYDQISTHGLMKGYTTSELSHLIDELRFKGFLNENDEIL
MCDTSIKKLLSNEVEVFTTPFKQKATEKVFINTVEGVDRVLFSQLVEVRKKLSDKLTIAP
VSIFSDYTLEEFAKRKPASKQDMINIDGVGSYKLKHYCPAFLETIQNYKAKV
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaaacattatcgcattactttgggtatgaaacgtttcgaccaggacaagaagaa
attattagcaaagtattagaccatcgtaatgtgcttggtgtcttaccaactggtggaggt
aagtctatatgctatcaagtaccaggtttattgttaggtggtacaacaattgtaataagt
ccactaatatcattaatgaaagatcaagtggatcaattaaaagcgatgggaattcaagct
gcttttttaaatagtagtttgactcaaaaagagcaacaacgtattgaaaaagcattatca
aatggagaaattcaatttttgtatgttgcaccagaacgatttgaaaaccgatatttttta
aatatgcttcagcgtataaagattcacttagtcgcgtttgatgaagcgcattgtatttct
aaatggggtcatgatttcaggccgagttaccaaaatgttatttcaaaagtatttacgtta
cctcaagattttacaataatagcgttgacagcaactgccacggttgaagtacagcaagat
attagagaaaagttaaatatcgctcaaactgatcaaattaaaacgagtactaagcgtaga
aacttaatttttaaagtaaatcctacttatcaacgtcaaaaatttatattggattatatt
aaaacacacgatgaagatgcaggtattatttattgttctacacgtaagcaagttgaagag
cttcaagaagccttagaaagtcagaaaattgaaagtgttatatatcatgcaggtttgagc
aataaagaaagagaagaagcgcagaatgatttcttatttgatcgtgttaaagtagtcgtt
gctacaaatgcttttggtatgggtattgataaatccaatgtacgctttgttattcattat
aatatgcctggagatttagaatcttattatcaagaagcgggtcgtgcaggtcgtgacggg
ttgaaaagtgaatgtattttgttatttagcgaacgcgatatcaatttacacgagtatttt
ataacagtctctcaagctgatgatgactataaagataaaatgggcgaaaagttaactaaa
atgattcaatatacaaaaacaaaaaaatgtctagaagcaacaattgtccattattttgaa
ccgaatgaaaaattagaagaatgtgaacaatgtagtaattgtgttcaacaagataaatca
tataatatgacacaagaagctaagatgattattagttgcatcgctcgtatgaaacaacaa
gagagttatagtgttatcattcaagtgttaagaggagagtcaacagattatattaagtat
aaaggttatgaccaaatttcaacccatggtttaatgaaaggttacacaacatcagaatta
agtcacttaatagatgaattaagattcaaagggttcttaaatgaaaatgacgaaatatta
atgtgtgatacttcaattaaaaaattactcagtaatgaagtagaagtattcacaacacca
tttaagcaaaaagcgactgaaaaagtatttataaatacggttgaaggggttgaccgagta
ttattcagtcagttggtagaagttcgtaaaaagttaagtgacaaattaacgatagcacct
gtaagtatattttctgattacacgttggaggaatttgctaaacgtaagcctgcttcgaaa
caagatatgattaatattgatggcgtaggtagttacaaattaaaacattattgtccagca
tttttagaaacgattcaaaattataaagccaaagtatag
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