Staphylococcus auricularis: I6G39_03595
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Entry
I6G39_03595 CDS
T07334
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
saul
Staphylococcus auricularis
Pathway
saul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
saul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I6G39_03595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
saul03019
]
I6G39_03595
03009 Ribosome biogenesis [BR:
saul03009
]
I6G39_03595
Enzymes [BR:
saul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
I6G39_03595
Messenger RNA biogenesis [BR:
saul03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
I6G39_03595
Ribosome biogenesis [BR:
saul03009
]
Prokaryotic type
rRNA helicases
I6G39_03595
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
Cas3-like_C_2
AAA_19
CMS1
DOPA_dioxygen
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
QPT06738
LinkDB
All DBs
Position
731468..732961
Genome browser
AA seq
497 aa
AA seq
DB search
MQNFKELGISAKTVETLESMGFTEATPIQKDSIPLALEGKDILGQAQTGTGKTGAFGIPI
IEKVAGKKGVQALLLAPTRELAMQVAEQIKSFAVGQPIQVVTVFGGMPIDRQIKALKKGP
QIVVGTPGRVIDHLNRRTLKTNDIHTLVLDEADEMMNMGFIDDMKFIMDKIPAEQRQTLL
FSATMPKAIQTLVQQFMKSPEIVKTMNNEISDPHIDEYYTIVKELEKFDTFTNFLDVHQP
DLAIVFGRTKRRVDELTSALLSKGYKAEGLHGDITQAKRLEVLKKFKNDQIDILVATDVA
ARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFVNPIEMDYIRQIEQTNG
RQMKALRPPHRKEVLKARENDIKDKVKRWMSNPSEPRLQRIAYDLLEEYNDVELIASLLQ
ELVEANDEVEVQLTFEKPLARKGRNNKGGPRRNNKRGDGKYDNKNRRNRNYNNKKGNHDR
NSNKKSMKGRTFADHKK
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaaattttaaagagttagggatctcggctaaaacagtagaaaccctagaatcaatg
ggttttacagaagccacaccgatacaaaaagatagtatccctcttgccttagaaggtaaa
gacattcttggccaagcacaaacaggtacaggtaaaacaggtgctttcggtatccccatt
atagaaaaagttgccggcaaaaaaggtgttcaagccttgttattagctccaacaagagaa
ttggcgatgcaagtcgcagaacaaatcaaatcttttgcggtgggacaaccgattcaagta
gtgactgtctttggtggtatgccgatcgaccgccaaattaaagcgttgaaaaaaggacct
caaatcgtggtagggacacctggacgtgtgattgaccacttaaatcgtcgtacccttaaa
acgaacgatattcataccctcgtattagatgaagcagacgaaatgatgaacatgggcttc
atcgacgatatgaaatttatcatggacaaaattcctgcagaacaacgtcaaacactattg
ttctcagcgacaatgcctaaagcaatccaaactttagtacaacaatttatgaaatcccca
gaaatcgtgaaaacgatgaataacgaaatctcagaccctcacatcgatgaatattataca
atcgtgaaagaattagaaaaatttgatacgtttacgaacttcttagatgtacatcaaccc
gatttagcaattgtgtttggtcgtacaaaacgtcgtgttgatgaattaacaagtgcatta
ttatcaaaaggctataaagcagaagggttacacggtgatatcactcaagccaaacgtctt
gaagtgttgaagaaatttaaaaacgatcaaatcgatatcttagtagcgactgacgttgct
gcacgtggtttagatatttctggcgtcagtcacgtttacaactttgatattccgcaagat
actgaaagttatacgcaccgtatcggacgtacaggccgtgcaggtaaagaaggtattgcg
gtaacattcgttaatcctattgaaatggattatattagacaaatcgagcaaacgaatggt
cgccaaatgaaagcacttcgtcctccacatcgtaaggaagtattaaaagcacgtgaaaac
gacattaaagataaagtgaaacgctggatgtctaatcctagtgaaccaagacttcaacgc
atcgcttatgatttattagaagaatataacgatgtagaacttatcgcgtcattacttcaa
gaactcgtagaagcaaacgatgaagtggaagtacaattaacatttgaaaaaccattagca
cgtaaaggccgtaataacaaaggtggtccacgccgtaacaataaacgtggtgatggtaaa
tacgataataaaaatcgtcgtaatagaaactacaataataaaaaaggcaaccacgaccgt
aactcaaataaaaaatctatgaaaggtcgcacatttgctgatcataaaaaataa
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