Staphylococcus auricularis: I6G39_05755
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Entry
I6G39_05755 CDS
T07334
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
saul
Staphylococcus auricularis
Pathway
saul02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
saul00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
I6G39_05755 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
saul03021
]
I6G39_05755 (rpoD)
Transcription machinery [BR:
saul03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
I6G39_05755 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
tify
Motif
Other DBs
NCBI-ProteinID:
QPT05213
LinkDB
All DBs
Position
1151163..1152269
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AA seq
368 aa
AA seq
DB search
MSESKVKVKKQTIDPTLTMEDVKKQLLEKGKKEGQLSHEEISEKLQHFEMDSDQMDEFFD
QLNDNEIKLVNQKDNNDTDESLNPNDLSAPPGVKINDPVRMYLKEIGRVNLLSAQEEIEL
AKRIEQGDEIAKSRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLIKAVEKFDFSKG
FKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRIQRQLLQDLGRDPAPEEIG
EEMDLPPEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQEAQSPSDHAAYELLKEQL
EDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRHPSRS
KRLKDFMD
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaagtaaagtcaaagtaaaaaaacaaaccatagatccaactttaacaatggaa
gatgttaaaaaacaattattggaaaaaggtaaaaaagaaggtcaattaagtcatgaagaa
atttctgagaaactgcaacactttgaaatggacagtgaccaaatggatgaattcttcgac
caacttaatgataatgagattaagttagtcaatcaaaaagataataacgatacagacgag
tcgttaaaccctaacgatttgagcgctcctccaggcgtcaaaattaatgaccctgtccgg
atgtatcttaaagaaattggacgcgtcaacttattgagtgcccaagaagaaattgaactt
gcgaaacgcattgagcaaggtgatgaaattgctaaatcacgtttagctgaagccaacctt
cgtttagtcgtcagtatcgcaaaaagatacgtgggtcgcggcatgttattcttagactta
attcaagaagggaatatgggcttaattaaagcagtagaaaaatttgacttcagtaaagga
ttcaaattctctacttacgctacctggtggattcgtcaagcgattacaagagcgattgca
gaccaagccagaacgatccgtattccggtacacatggttgaaacgatcaataaattaatt
cgtattcaaagacaattacttcaagatttaggtcgtgatccagcaccagaagaaatcggt
gaagaaatggatttaccacctgaaaaagtacgagaaatcttgaaaatagcacaagaacca
gtttcattagaaacgccaattggtgaagaagacgacagccaccttggtgactttattgaa
gatcaagaagcgcaaagtccttcagaccatgcagcatatgaactgttaaaagaacaatta
gaagatgtattagatacgttaacagaccgcgaggaaaatgtcttacgtctacgttttgga
ttagacgatggacgtacacgcactttagaagaagtaggtaaagtattcggtgtcactaga
gaacgtattcgtcaaatcgaagcgaaagcactaagaaaattaagacaccctagcagaagt
aaacgtctaaaagactttatggattaa
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