Staphylococcus auricularis: I6G39_07085
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Entry
I6G39_07085 CDS
T07334
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
saul
Staphylococcus auricularis
Pathway
saul03030
DNA replication
saul03430
Mismatch repair
saul03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
saul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I6G39_07085
03430 Mismatch repair
I6G39_07085
03440 Homologous recombination
I6G39_07085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
saul03032
]
I6G39_07085
03400 DNA repair and recombination proteins [BR:
saul03400
]
I6G39_07085
Enzymes [BR:
saul01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
I6G39_07085
DNA replication proteins [BR:
saul03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
I6G39_07085
DNA repair and recombination proteins [BR:
saul03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
I6G39_07085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
DNA_pol3_a_NI
HHH_6
HHH_3
tRNA_anti-codon
RNase_H_2
T2SSK
YhfH
Motif
Other DBs
NCBI-ProteinID:
QPT05458
LinkDB
All DBs
Position
complement(1427182..1431498)
Genome browser
AA seq
1438 aa
AA seq
DB search
MTMTSQEKFKILADQVKIANQLDEDILENSELTRIDVSTKSRSWTFQITLPRFLSQEDYT
LFTHAIKEEFSPIAEVNWQFTIRDTSNQDEHAGKYFGHCIDQTALSPKVKGQLKQKELIV
SGNVLKVICQNDIERNHFDKVCNGSLVKAFKQCGFDINKVVFETDETDQDKNLASLEAYI
QQEDEQSAKETTEKLEKMKAEKEKQQDNNESTVEKCQIGKPIQVEQVRPIEQIVEEEFKV
AIEGVIFDMNIKELKSGRHIIELKVTDYTDSLVLKMFTRKNKDDLEHFKALSVGKWIRAQ
GRIEEDSFVRDLVMMMNDIEEIKKSPKQDKAPEKRVEFHLHTSMSQMDGVPSITSYVEQA
AKWGHKAIAVTDHNVVQAFPEAHNAAEKNDIKMIYGMEGMLVDDGVPIAYKPQDRELKTA
TYVVFDVETTGLSNQYDHIIELAAVKVKDGEIIDQFERFSNPHEPLSDTIKNLTHITDDM
LEDAPEIDEVLTEFKEWVGDAIFVAHNASFDMGFIDTGYERLGFGESTNGVIDTLELSRT
INTEYGKHGLNYLAKKYGVELTQHHRAIYDTETTAYIFIKMLKQLEELNVKNHKDINQSL
SNEDAYKRARPNHVTLIVQNQKGLKNLFKIVSASLVKYYYRTPRIPRSLLDEYREGILVG
TACDEGEVFTAVMQKDQSEVERIAKYYDFIEVQPPALYQDLIDRELVRDNDTLHEIYDRL
IQAGEANQIPVIATGNAHYLFEHDAIARKILIASQPGNPLNRSTLPEAHFRTTDEMLSEL
HFLGEDKAYELVVKNTNELADRIERVVPIKDKLYTPRMDGANEEIRELSYTHAKEIYGED
LPQIVIDRLEKELESIIGNGFSVIYLISQRLVKKSLDDGYLVGSRGSVGSSFVATMTEIT
EVNPLPPHYICPKCKESTFFDDGSVGSGFDLPDKKCEHCGCDMIKDGHDIPFETFLGFKG
DKVPDIDLNFSGEYQPEAHNYTKVLFGEDKVFRAGTIGTVAEKTAFGYVKGYLNDQGIHK
RGAEVDRLVKGCTGVKRTTGQHPGGIIVVPDYMDIYDFSPVQYPADDQSASWMTTHFDFH
SIHDNVLKLDILGHDDPTMIRMLQDLSGIDPKTIPVDDKQTMGIFNSPEALGVTEDQIMC
KTGTFGVPEFGTAFVRQMLEDTKPTTFSELVRISGLSHGTDVWLGNAQDLIRSGQCDLSS
VICCRDDIMVYLMYNGLEPSLAFKTMEFVRKGRGLTDDMVDAMEENEVPEWYMDSCRKIK
YMFPKAHAAAYVLMAVRIAYFKVHYPLYYYASYFTVRASDFDLITMIKDKDSIRNTVKDM
YSRSMDLGKKEKDLLTVLEIMNEMAQRGYRMQPISLEKSQAFEFIIEGDTLIPPFIAVPG
LGENVAKRIVEAREEGPFLSKEDLNKKAGLSQKVIDYLDELGSLPDLPDKAQLSIFDM
NT seq
4317 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgacaagtcaagaaaaatttaaaatccttgcagatcaagtgaaaatagcgaat
caattagatgaagatattttagaaaatagtgagttaacgcgcattgatgtttcgactaaa
tctcgcagttggacatttcaaatcacattaccacgctttttatctcaagaggattataca
ctgttcacccatgcaattaaggaagaattcagtccaattgcggaagtgaattggcaattt
acaattcgtgatacatcaaaccaggatgaacatgctggcaagtatttcggccactgtata
gatcaaactgctttatctcctaaagttaagggacaattgaaacaaaaagaattgattgta
tcaggcaacgtgttaaaagtcatctgtcaaaacgacatcgaacgcaatcactttgataaa
gtatgtaatggtagcttagtgaaggcattcaaacaatgtggcttcgatatcaataaagtc
gtgtttgaaacagatgaaacggatcaagacaaaaaccttgcgtcattagaggcttacatt
caacaagaagatgaacaaagcgccaaagaaacgactgaaaagcttgaaaaaatgaaagct
gaaaaagaaaaacaacaagataacaacgaaagtaccgttgaaaaatgtcaaatcggtaaa
cctatacaagtcgaacaagtgcgcccgatcgaacaaattgtggaagaagaattcaaagtt
gcgattgaaggtgtcatctttgatatgaatattaaagagcttaaaagtggacgtcatatc
attgagcttaaagtgactgactatacagactcactcgtacttaaaatgtttacacgtaaa
aataaagatgatcttgaacattttaaagcactcagtgtcggaaaatggattcgtgcacaa
ggtcgtatagaagaagactcattcgtccgtgacctcgttatgatgatgaatgatatcgaa
gaaattaagaaatcacctaaacaagataaagcacctgaaaaacgtgttgaattccatcta
catacttcaatgagtcaaatggatggtgtaccaagcattacatcatacgtggaacaagca
gcaaaatggggtcacaaagcgatcgcagtgacggaccataacgtggttcaagcatttcca
gaagcgcataatgcggctgagaaaaatgatataaaaatgatttacggtatggaagggatg
ctcgtagatgacggggttccaatcgcatataaaccgcaagatcgagagctaaaaacagca
acatatgtcgtatttgacgttgagactacaggtttatccaaccagtatgatcacattatt
gaacttgcagcggttaaagttaaagacggtgaaatcattgatcagtttgaacgtttcagt
aacccacatgaaccactttcagatacgattaaaaacctcacacatattacagatgatatg
ttagaagatgcacctgaaatcgatgaagtattaactgaattcaaagaatgggtaggagac
gccatctttgttgcacataacgcttcgttcgatatgggcttcatcgataccggttatgaa
cgtcttggctttggtgaatcaacgaacggtgtcattgatacgttggaattatctcgtaca
attaataccgaatatggtaaacacggtttgaattatttggctaaaaaatacggcgttgaa
cttactcaacaccacagagccatttacgatacagaaacgacagcttatatctttattaaa
atgttgaaacaacttgaagaattaaatgtcaaaaatcataaagatatcaatcaatcacta
tcgaacgaagatgcttataaacgcgcacgtccgaaccatgtgacactcatcgtacaaaat
caaaaagggctcaaaaatctcttcaaaattgtgagtgcatcactcgtgaaatattattac
cggacaccacgtattcctcgttccttgcttgatgaatatcgtgaaggtattttagtagga
acagcgtgcgatgaaggtgaagtgttcacagcagtaatgcaaaaagaccaatctgaagtt
gaacgtatcgcaaaatattatgacttcatcgaggtacaacctccagccttgtatcaagac
ttaatcgatcgtgaattagtacgtgataatgacacgttacatgaaatttatgacagatta
attcaagcaggtgaggccaatcaaatacctgtgatagcaacaggcaacgctcactattta
tttgaacacgatgcgattgcacgaaaaatattgattgcttcacaaccaggtaatccgtta
aatcgctcaactttaccagaagcgcactttagaacaacagatgaaatgttgtcagaatta
catttcttaggcgaagataaagcttacgaattggttgttaaaaatacgaacgaactcgct
gaccgcatcgaacgcgtggtaccaatcaaagacaaactgtatacgccacgtatggatggt
gcgaacgaagaaattcgtgaactcagctacacccatgccaaagaaatctatggtgaagat
ttaccacaaatcgtgatcgatcgtttagaaaaagaattagaaagtattattggtaatggt
ttctcagtcatctatctcatctcccaacgtttggttaaaaaatcgctcgatgacggctac
ttagttggatctcgtggttccgttgggtcaagctttgtagcaacgatgactgaaatcact
gaagtaaacccactgccaccgcactatatttgtccgaaatgtaaagaaagtacgttcttt
gacgatggttctgtcggctctggatttgatttaccagataaaaaatgtgaacactgcggt
tgcgatatgattaaagacggacatgatattccatttgaaacgttcttaggatttaaaggg
gataaagttcccgatatcgacttgaacttcagtggggaatatcaaccagaagcgcataac
tacacgaaagtactcttcggtgaagataaagtattccgtgcgggtacaatcggtacagtt
gccgaaaaaacagcttttggttatgtgaaaggttacttgaacgaccaaggtattcataaa
cggggcgctgaagtggatcgtcttgtcaaaggttgtacgggtgtgaaacgtacaaccgga
caacaccctggtggtattatcgtcgtacctgattacatggatatttacgacttttcacct
gtacagtatccagcagatgaccagtctgcttcatggatgacgacgcatttcgacttccac
tctatccatgacaacgtgttgaaattggatatacttggccacgatgatccgacaatgatc
cggatgttacaagacttgtcaggcatcgatccgaaaaccattcctgtagatgacaaacaa
acaatgggcatcttcaattcgcctgaagcattaggtgtgacagaagatcaaatcatgtgt
aaaacaggcacattcggtgtaccagaatttggtactgcctttgtacgccaaatgttagaa
gatacaaaaccgacaacattctcagaattggttcgtatttccgggttatctcacggtacc
gatgtttggttaggtaacgctcaagacttgattcgatcaggtcaatgcgacttatctagc
gtcatttgttgtcgtgacgatattatggtttatcttatgtacaatggtttagagccatca
cttgccttcaagacgatggaattcgtacgtaaaggtcgtggcttaaccgatgacatggta
gatgctatggaagaaaacgaagtacctgaatggtatatggattcatgtcgtaagattaaa
tacatgttccctaaagcccacgctgcggcttatgtacttatggcagttcgtatcgcgtac
ttcaaagtgcactatccactttattattatgcaagttacttcacagtacgtgcatctgac
tttgatttaattacgatgatcaaagataaagacagtatccgtaatacggtgaaagacatg
tatagtcgctcaatggatttaggtaaaaaagaaaaagacttattgactgtgctagaaatc
atgaatgaaatggcacaacggggttaccgtatgcagcccatcagtcttgaaaaaagccaa
gcttttgaatttatcattgaaggcgatacacttattccaccatttatcgcggttcctggc
cttggtgaaaatgttgcgaaacgtattgtagaagctagagaagaaggaccgttcttatct
aaagaagacttaaataaaaaagcagggttatcccaaaaagtcatcgattatttagatgaa
ttaggttcactcccagatttaccggacaaagcgcaattgtctattttcgatatgtaa
DBGET
integrated database retrieval system
