Staphylococcus aureus subsp. aureus CN1 (CA-MRSA): SAKOR_01203
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Entry
SAKOR_01203 CDS
T02826
Name
(GenBank) Zn-dependent hydrolase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
saun
Staphylococcus aureus subsp. aureus CN1 (CA-MRSA)
Pathway
saun03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
saun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SAKOR_01203
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
saun03019
]
SAKOR_01203
Messenger RNA biogenesis [BR:
saun03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SAKOR_01203
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
vATP-synt_E
HTH_10
Imm49
Motif
Other DBs
NCBI-ProteinID:
AGU61343
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Position
1238071..1239795
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AA seq
574 aa
AA seq
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MNSEFIYGRVTNLGGKILSLIKKKNKDIRIIPLGGVGEIAKNMYIVEVDDEMFMLDAGLM
FPEDEMLGIDIVIPDISYVLENKDKLKGIFLTHGHEHAIGAVSYVLEQLDAPVYGSKLTI
ALIKENMKARNIDKKVRYYTVNNDSIMRFKNVNISFFNTTHSIPDSLGVCIHTSYGAIVY
TGEFKFDQSLHGHYAPDIKRMAEIGEEGVFVLISDSTEAEKPGYNTPENVIEHHMYDAFA
KVRGRLIVSCYASNFIRIQQVLNIASKLNRKVSFLGRSLESSFNIARKMGYFDIPKDLLI
PITEVDNYPKNEVIIIATGMQGEPVEALSQMAQHKHKIMNIEEGDSVFLAITASANMEVI
IANTLNELVRAGAHIIPNNKKIHASSHGCMEELKMMINIMKPEYFIPVQGEFKMQIAHAK
LAAEAGVAPEKIFLVEKGDVINYNGKDMILNEKVNSGNILIDGIGIGDVGNIVLRDRHLL
AEDGIFIAVVTLDPKNRRIAAGPEIQSRGFVYVRESEDLLREAEEKVREIVEAGLQEKRI
EWSEIKQNMRDQISKLLFESTKRRPMIIPVISEI
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgaatagtgagtttatatatggacgggtaacaaatttaggaggtaagattttgagttta
ataaagaaaaagaataaagatattcgcattataccattaggcggtgttggcgaaattgct
aaaaatatgtatatcgttgaagtagacgatgaaatgtttatgttagatgctggacttatg
tttccagaagacgaaatgctaggtattgatattgttataccagacatttcatacgtactt
gaaaataaagataaattgaagggtatattccttacacacggacatgagcacgcgattggt
gcagtgagttatgttttagaacaattagatgcaccagtatatggatctaaattgacaata
gcgttaattaaagaaaatatgaaagcccgtaatattgataaaaaagttcgctactacaca
gttaataatgattcaattatgagattcaaaaacgtgaatattagtttctttaatacgaca
cacagtattcctgatagtctaggtgtttgtattcatacttcatatggtgccattgtgtat
acaggtgaatttaagtttgaccaaagtttacatggacattatgcaccagatattaaacgt
atggcagagattggtgaagaaggcgtatttgtcttaatcagtgattctactgaggcagag
aaacctggatataatactccggaaaatgtgattgaacatcatatgtatgacgcttttgca
aaagtgcgaggtcgcttgattgtttcatgttatgcttcgaactttatacgtattcagcaa
gttttaaatattgctagcaagctaaatcgtaaagtgtcatttttaggaagatcacttgaa
agttcatttaatattgctcgtaaaatggggtatttcgacattcctaaagatttgctaatt
cctataacagaagttgataattaccctaaaaatgaagtgataattatagctactggtatg
caaggagaacctgtagaagccttaagtcaaatggcgcaacataagcataaaattatgaat
atcgaagaaggcgattctgtatttttagcaattacggcttctgctaatatggaagttatc
attgcgaatacattaaatgagcttgtacgtgctggcgcacatattattccaaataacaag
aagattcatgcttcaagtcatggttgcatggaagaattaaaaatgatgattaatattatg
aaacctgaatactttattcctgtacaaggtgaatttaaaatgcagatagcacatgcgaag
ctagcagctgaagcaggtgttgcaccagaaaagattttccttgtggaaaaaggagatgtc
attaattacaacggtaaagatatgatattaaatgaaaaggtaaattcaggaaatatttta
atagatggtattggtattggggatgtaggaaatatcgtgttgagagaccgtcatctttta
gcagaagatggtatctttattgctgtagtaacgttagatcctaaaaatagacgtatagct
gcgggacctgaaattcaatctcgtgggtttgtatatgtacgtgaaagtgaagacttatta
cgtgaagcagaagagaaagtacgtgaaatagtagaggctggtttacaagaaaaacgcata
gaatggtctgaaattaagcaaaatatgcgtgatcaaattagtaaactattattcgaaagt
acaaaacgtcgtcctatgattattccagtaatttctgaaatttaa
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