Streptomyces autolyticus: BV401_04345
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Entry
BV401_04345 CDS
T04980
Name
(GenBank) RNA polymerase subunit sigma
KO
K03090
RNA polymerase sigma-B factor
Organism
sauo
Streptomyces autolyticus
Brite
KEGG Orthology (KO) [BR:
sauo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sauo03021
]
BV401_04345
Transcription machinery [BR:
sauo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BV401_04345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_23
HTH_Crp_2
KORA
HTH_24
DUF7343
HTH_1
MOZ_SAS
GerE
HTH_3
Motif
Other DBs
NCBI-ProteinID:
AQA09838
LinkDB
All DBs
Position
complement(1048368..1049174)
Genome browser
AA seq
268 aa
AA seq
DB search
MTSARAHPRAHPKHAHDDAPDTSAEFRRIAGLPDGREKENLRQDVVRAWMPMAERIAAQF
RNRGESLEDLRQVAMVGLVKAVKRYEPDRGSAFESYAVPTVVGEVKRHFRDHMWGLHVPR
RVQELRNRVRTAVQDLTRSPDDRSPSVKDIAHHTGMTEEDVLVGMEAIDSFRTLSLDAAL
RGADDGYALVDTLGSAEPSYERVVQRESLKPCLRRLPEREREILYLRFFCDETQSRIADR
LGISQMHVSRLISRTCARLGEEVGAHAA
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccgcacgagcacacccccgagcgcaccccaagcacgcgcatgacgacgccccc
gacacctccgccgagttccgccggatcgccggtctgccggacggccgggagaaggagaac
ctgcggcaggatgtcgtccgggcctggatgccgatggccgagcgcatcgccgcgcagttc
cgcaaccgcggcgaaagcctcgaggatctgcggcaggtggccatggtcggcctggtcaag
gcggtcaagcgctatgagccggaccggggttcggccttcgagagctacgccgtcccgacc
gtggtcggggaggtcaagcggcacttccgcgaccatatgtggggtctgcacgtcccccgg
cgggtccaggagttgcgcaaccgggtgcgcaccgccgtccaggacctcacccgctcaccc
gacgaccgttcgcccagcgtcaaggacatcgcacaccacaccggcatgaccgaggaggac
gtcctcgtcggcatggaggcgatcgacagcttccgtacgctgtcgctggacgccgcgctg
cgcggcgccgacgacggctacgcgctggtggacaccctcggctccgccgagccctcctac
gagcgggtcgtccagcgcgaatccctcaagccctgtctgcgcaggctccccgagcgtgag
cgggagatcctctatctgcggttcttctgtgacgagacacagagccggatcgccgaccgg
ctcggcatctcccagatgcatgtctcgcgcctcatcagccgcacctgcgcccgtctgggc
gaggaggtcggcgcccacgcggcctga
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