Streptomyces malaysiensis subsp. malaysiensis CGMCC0516: BV401_19335
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Entry
BV401_19335 CDS
T04980
Name
(GenBank) RNA polymerase subunit sigma
KO
K03090
RNA polymerase sigma-B factor
Organism
sauo
Streptomyces malaysiensis subsp. malaysiensis CGMCC0516
Brite
KEGG Orthology (KO) [BR:
sauo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sauo03021
]
BV401_19335
Transcription machinery [BR:
sauo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BV401_19335
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
HTH_23
MarR_2
HTH_3
HTH_24
DUF7343
HTH_10
HTH_Crp_2
MarR
Sigma70_ECF
GerE
Motif
Other DBs
NCBI-ProteinID:
AQA12289
UniProt:
A0ABM6HEA2
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All DBs
Position
4888597..4889556
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AA seq
319 aa
AA seq
DB search
MEETMSPRLDDTRTEPSGSTRTTVSSAPLPEQFTPDADAPAAVGHLFDELPELSDLPEIP
PYDTVAPVDARALSKTLFERLQVLEEGTHEYAYVRNTLVELNLALVKFAASRFRSRSEPM
EDIVQVGTIGLIKAIDRFETGRGVEFPTFAMPTIVGEIKRFFRDTSWSVRVPRRLQELRL
DLAKAGDELAQRLDRAPTVRELAERLDITQAEVVEGMAASNAYTASSLDAQPEEDDSEGA
LADRIGYEDHGLEGIEYVESLKPLIADLPARDRKILSLRFVANMTQSEIGEELGISQMHV
SRLLSRTLRRLRKGLMIEE
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggaggagactatgtcaccccgcctcgacgacacgcgtaccgaaccctcggggagtact
cggaccaccgtttcgtcggcccccctgcccgagcagttcacccccgacgctgacgccccg
gcggccgttggccatctcttcgatgaattgccggaattgtccgatctgccggagataccc
ccgtatgacacggtagcaccggtggacgcgagggctctgtcgaagaccctcttcgaacgt
ctccaggtgctggaggaaggcacccacgagtacgcctatgtgcgtaacaccctggtcgag
ctcaacttggcgctggtcaagttcgccgcctcccggttccgctcccgcagcgagccgatg
gaggacatcgtccaggtcggcaccatcggcctgatcaaggccatcgaccgcttcgagacg
ggccggggcgtggagttcccgaccttcgcgatgccgacgatcgtcggtgagatcaaacgc
ttcttccgcgacaccagttggtcggtgcgcgtgccgaggcggcttcaggaactccgtctc
gacctggccaaggccggcgacgagctggcccagcggctcgaccgcgcccccaccgtccgc
gagttggccgagcggctggacatcacccaggccgaggtcgtcgagggcatggccgcgagc
aacgcgtacaccgcgagctcgctggacgcccagccggaggaggacgactccgagggagcg
ctggccgaccggatcggatacgaggaccacgggctcgaaggaatcgagtacgtcgagtcc
ctgaagccgctgatcgccgatctgcccgcccgcgaccggaagatcctctccctgcgcttc
gtggccaatatgacgcagtcggagatcggtgaggagctgggcatctcccagatgcatgta
tcgcggctgctgtcgcgcaccctccgtcggctccgtaagggtctgatgatcgaggagtga
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integrated database retrieval system
