Streptomyces malaysiensis subsp. malaysiensis CGMCC0516: BV401_22040
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Entry
BV401_22040 CDS
T04980
Name
(GenBank) hypothetical protein
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
sauo
Streptomyces malaysiensis subsp. malaysiensis CGMCC0516
Pathway
sauo03030
DNA replication
sauo03430
Mismatch repair
sauo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sauo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BV401_22040
03430 Mismatch repair
BV401_22040
03440 Homologous recombination
BV401_22040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sauo03032
]
BV401_22040
03400 DNA repair and recombination proteins [BR:
sauo03400
]
BV401_22040
Enzymes [BR:
sauo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BV401_22040
DNA replication proteins [BR:
sauo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BV401_22040
DNA repair and recombination proteins [BR:
sauo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BV401_22040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNAX_ATPase_lid
RuvB_N
AAA_22
Rad17
AAA_14
AAA_30
zf-CXXC
AAA_5
AAA_18
AAA_19
AAA_16
nSTAND3
Mg_chelatase
AAA_28
TsaE
Motif
Other DBs
NCBI-ProteinID:
AQA16390
UniProt:
A0ABM6HQ63
LinkDB
All DBs
Position
complement(5516130..5518730)
Genome browser
AA seq
866 aa
AA seq
DB search
MSSLALYRRYRPETFAEVIGQEHVTGPLQQALRNNRVNHAYLFSGPRGCGKTTSARILAR
CLNCEKGPTPTPCGECQSCQDLARNGPGSIDVIEIDAASHGGVDDARELREKAFFGPASS
RYKIYIIDEAHMVTSAGFNALLKVVEEPPEHLKFIFATTEPEKVIGTIRSRTHHYPFRLV
PPGTLRDYLGEVCGREAIPVEDGVLPLVVRAGAGSVRDSMSVMDQLLAGASDDGVTYAMA
TSLLGYTDGSLLDSIVDAFAATDGAAAFEVVNRVIEGGNDPRRFVADLLERLRDLVILAA
VPDAAEKGLIDAPADVVERMQAQASVFGGAELSRAADLVNEGLTEMRGATSPRLQLELIC
ARVLLPAAFDDERSVQSRLERLERGALAGGLGGGGGAGVGGAAGGGVAGPAGPGPAMGYV
PGPDAHVPAAPPAGPSGPAAARAAMAGGGPGQGQAPGGPGGAEDPGGWPAGARPAADSGQ
GGGPGGGPGGAGDSGQQGGAPAAPAEGGGGQRPGAWPSGAQSPAAEGGGSRPGAWPTASA
PGSGASGAGGAPGAGGPGGASGGGGASGGGGARGAGVPARQPGGWPTATAPGQGGGPPAQ
PPAAPSAPTGPSAPAAPAAPSAPSQGAPGMAQGAVQVRQMWPDILEAVKNRRRFTWILLS
QNATVAGFDGTTLQLGFSNAGARDSFVGGGSEDVLRQALQDAIGVQWRIEAIVDPSGGAG
QQGGGPGGPGGPGGPGGFGGAGGPSGPGGYGGGGGSATGGGFGGGSGAGGGGFGGGGQPA
APRQPAPRPAPASPPPAAPSAPSGSADAGPPPEAAPAYREPEPPRVALEDDMPAEDDADL
DDSALSGHDLIVRELGATVIEEIVNE
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgtccctcgcgctgtaccgccgctaccgccccgagaccttcgcggaggtcatcggg
caggagcatgtcaccggcccgttgcagcaggcgctgcgcaacaaccgggtcaaccacgcg
tatctgttcagcggtccccgcgggtgtggcaagacgaccagcgcgcgcatcctggcccgc
tgtctgaactgtgagaagggtcccaccccgacgccctgcggcgagtgccagtcgtgccag
gacctcgcgcggaacggaccggggtcgatcgatgtgatcgagatcgacgccgcgtcccac
ggtggtgtggacgacgcccgtgagctgagggagaaggcgttcttcgggcccgcgtcgagt
cgttacaagatctacatcatcgatgaggcccatatggtcacctcggcggggttcaacgcc
ctgctgaaggtggtcgaggagcccccggagcacctcaagttcatcttcgcgaccaccgag
ccggagaaggtcatcggcaccatccggtcgcgtacgcaccactatccgttccggctcgtg
ccgcccgggacgctccgtgactatctgggagaggtctgcggacgcgaggcgatcccggtc
gaggacggggtgctgccgctggtcgtcagggccggggccgggtccgtgcgggattcgatg
tcggtgatggaccagttgctcgcgggtgcgagcgacgacggcgtgacctacgccatggcg
acctcgctgctcggctatacggacggctcgctgctcgactcgatcgtggacgccttcgcc
gcgaccgacggagcggcggcgttcgaggtcgtcaaccgcgtgatcgaggggggcaacgac
ccccggcgcttcgtcgccgatctgctggagcggctgcgcgatctggtgatcctcgccgcc
gtgccggacgcggcggagaaggggctcatcgacgccccggccgatgtggtggagcggatg
caggcgcaggcgtcggtcttcggcggcgccgagctgagccgcgcggcggacctggtcaac
gagggcctgacggagatgcgcggcgccacttcgccgcggctccagctggagctgatctgc
gcccgggtgctgctgcccgccgccttcgacgacgagcgctcggtgcagtcgcgcctggag
aggctggagcgcggggcactcgcgggcggcctgggcggtggtggcggtgccggtgtcggc
ggcgctgccggtggtggcgtcgcggggccggctgggcccgggcccgccatggggtacgta
ccggggcccgacgcccacgttcccgccgcgccccccgccgggccgtccggtccggccgcc
gcgcgtgcggcgatggccgggggcgggcccggccaggggcaggccccaggcgggccgggc
ggtgccgaggaccctggtgggtggcccgcgggtgcgcggcccgccgcggacagcggccag
ggcggcggtccgggtggcggtccgggcggcgccggtgacagtggacagcagggcggtgcc
cctgccgcgcccgctgagggcggcggcgggcagcggccaggggcctggccgtcgggcgct
cagtccccagcggcggagggcggcggctcgcggcccggagcctggcccacggcttccgcg
cccggttccggggcgtccggtgcgggcggtgcgcctggtgcgggcggtccgggcggcgct
tccggtggcggcggtgcctccggtggtggcggtgcacggggcgccggggtgcccgcccgg
cagcccggcggctggcccacggccaccgcgccggggcagggcggcggcccacccgcgcag
ccacccgcggcgccctccgcgccgaccgggccttccgcacccgccgcgccggccgcccct
tccgcgccctcgcagggcgcaccgggcatggcgcagggcgccgtgcaggtgcggcagatg
tggccggacatcctggaggcggtcaagaaccgccgccgcttcacctggatcctgctgagc
cagaacgcgacggttgccggcttcgacggcaccaccctccagctcggcttctccaacgcg
ggcgcgcgtgacagcttcgtgggcggcggcagcgaggacgtcctgcggcaggcgctccag
gacgccatcggtgtgcagtggcggatcgaggcgatcgtcgacccctcgggcggcgccgga
cagcagggcggcggcccaggtggtccaggcggcccaggtggtccgggcggcttcggcggt
gccggtggcccgagcggtcccggcggctacggcggaggcggtggtagcgccaccggcggc
ggcttcggaggcggcagcggcgccggtggcggcggcttcggcggcggtggccagcccgcc
gcgccccggcagcccgcaccccggcccgcgcccgcctccccgcccccggccgcgccctcc
gcaccgtccggatcggcggacgcgggcccgccccccgaggcggcgcccgcgtaccgggag
cccgagcctccgcgggtcgcgctggaggacgacatgccggccgaggacgacgcggacctg
gacgactccgcgctgagcggccacgacctgatcgtccgcgagctcggtgccacggtgatc
gaagagatcgtcaacgagtag
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integrated database retrieval system
