Streptomyces autolyticus: BV401_22230
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Entry
BV401_22230 CDS
T04980
Name
(GenBank) RNA polymerase subunit sigma
KO
K03090
RNA polymerase sigma-B factor
Organism
sauo
Streptomyces autolyticus
Brite
KEGG Orthology (KO) [BR:
sauo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sauo03021
]
BV401_22230
Transcription machinery [BR:
sauo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BV401_22230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
GerE
MarR_2
HTH_3
NirdL-like_HTH
DUF7343
MarR
HTH_5
DUF134
HTH_37
DUF4423
Motif
Other DBs
NCBI-ProteinID:
AQA12754
LinkDB
All DBs
Position
5559253..5560086
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AA seq
277 aa
AA seq
DB search
MTVSARTAPRTPPQGDGGTESGRSRGADARALTQVLFAELSDLTPGTPEHARVRAALIEA
NLPLVRYAAARFRSRNEPMEDVIQVGTIGLINAIDRFDPDRGVQFPTFAMPTVVGEIKRY
FRDNVRTVHVPRRLHELWVQVNGATEDLTVLHGRSPTTAEIAERLRLSEEEVLACIEAGR
SYHATSLEAAQEGDGLPGLVDRLGYEDPALAGVEHRDLVRHLLVQLPEREQRILLLRYYS
NLTQSQISAELGVSQMHVSRLLSRSFARLRSANRIES
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgtgtcggcccgtaccgcgcccagaaccccgccccagggcgatggcggcaccgaa
agcggcagaagccgcggggccgacgccagagcgctcacccaggtgctcttcgccgaactg
tcggacctcacccccggaacccccgagcacgcccgcgtgcgcgccgcgctcatcgaggcc
aatctgccgctggtccgctacgccgcggcccgcttccgcagccgcaacgagcccatggag
gacgtgatccaggtcggcaccatcggcctgatcaacgcgatcgaccggttcgacccggac
cgcggggtgcagttcccgaccttcgccatgccgaccgtcgtcggcgagatcaagcgctac
ttccgcgacaacgtccgcaccgtccatgtgccgcgccggttgcatgagctatgggtgcag
gtcaacggcgcgaccgaggatctgaccgtgctgcacggccgctccccgacgacggccgag
atcgccgaacggctcaggctcagcgaggaggaggtgctcgcctgcatcgaggcgggccgc
tcgtatcacgccacctccctggaggccgcccaggagggcgacgggctgccgggactggtc
gaccggctcggctacgaggacccggcgctcgccggagtcgagcaccgcgatctggtgcgc
cacctcctcgtacaactgcccgagcgcgaacagcgtatccttttgcttcgttactacagc
aatctgacgcaatctcagatcagtgccgagctcggtgtctcccagatgcatgtgtcccgg
ctgctgtcccggagcttcgcccggctgagatccgcgaaccggatcgagtcctga
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