Streptomyces autolyticus: BV401_29500
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Entry
BV401_29500 CDS
T04980
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sauo
Streptomyces autolyticus
Pathway
sauo03420
Nucleotide excision repair
sauo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sauo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BV401_29500
03430 Mismatch repair
BV401_29500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sauo03400
]
BV401_29500
Enzymes [BR:
sauo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BV401_29500
DNA repair and recombination proteins [BR:
sauo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BV401_29500
MMR (mismatch excision repair)
Other MMR factors
BV401_29500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
TrAA12
Motif
Other DBs
NCBI-ProteinID:
AQA13930
LinkDB
All DBs
Position
7154431..7158249
Genome browser
AA seq
1272 aa
AA seq
DB search
MSVGTDSLSGVSARITDPEELKELLGIPFTPEQMACITARPAPQVIVAGAGSGKTTVMAA
RVVWLVGTGQVAPDRVLGLTFTNKAAGELAERVRKALVTAGIVDPDPDPGATEEAAGEPA
ISTYHAFAGQLLKDHGLRVGLEPSARLLADATRFQLAARVLRSAPGPYPALIRPFSDLVT
DLLALDAELAEHLVPVGRLRAYDTELLRTLEGTRLTNEALRKVPEAARARQELLGLVEAY
REEKRRRDLLDFGDQIAHAATLALDHPEVGRILREQFAVVLLDEYQDTSVAQRLLLSGLF
GGGTGHPVTAVGDPCQAIYGWRGASVANLDDFPEHFRHADDSPARRFALSENRRSGGRLL
DLANGLATPLRAMHEGVEALRPAPGAERDGAVRCALLPTHAEELAWLADSIAHLVRTGTP
PGEIAVLCRTAGDFAQIQGALVERDVPVEVVGLSGLLHLPEVADLVAVCEVLHDPGANAA
LVRLLTGPRWRIGPRALALLGRRARMLVSHGGPDGAEDDPDRRLAEAVEGTDPSEVISLA
DALDTFLEAGGGPDDGLPFSAEARVRFARLAAELRELRRSLADPLMDVLHRVLATTGLEV
ELSASPHALAARRRETLGNFLDVAAAFAGRDGGAAVDGEATLQGFLGFLRTAAQYEKGLD
NALPGGENTVKVLTAHKSKGLEWDVVAAPGLVAKQFPSEQSRESWTANAKVLPHELRGDA
RTLPDVTAWDSKGIAAFKDAMKGHQRTEELRLGYVTFTRPRSLLLGSGHWWGPTQKRPRG
PSAFLDALREHCEAGYGEIEAWAEPPEEGAENPALRESAADRAWPLPLDPAALGHRRRAA
DVVLAHLARIETAGEGPTARDEGRPPADGDPFPKPVDDLEPPEELEPPEDPEDPEDPEGL
EDLEAEDPEDPEWSEPPEDPYEGPYGDADEGPYGEGEAAEDPCDPYEDVGEGPYGDAQRP
DPHGAPDPGVPDITWEPDEGEMAPEEARLVGSWDRDLDALAGELRRARETVHEVLLPGTL
TASQLLRIAADPDGFARELARPMPRPPRPAARRGTRFHAWVESRFEALPLPFLGPDELPG
GEDGEAEIADERDLAALKEAFARTPYARRTPYRVEVPVQLTLAGRMVRGRIDAVYREPGT
GPDGGPRYEIVDWKTGRSRDADPLQLAIYRLAWAEQHGLPLSAVTAAFVYVRSGEVVRPA
GLPGRAGLERILLGENGDEPENAGGSGTGDGAGDGTGDGTGDGTGDGVGLGDADATGNDH
IDAGTVTESERT
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgggcaccgatagcctctctggagtgtcagcccgcatcaccgatcccgaggag
ctcaaggaactcctcgggatcccgttcaccccggagcagatggcgtgcatcaccgcacgg
cccgccccgcaggtgatcgtcgccggggcgggctccggcaagaccacggtgatggccgcc
cgtgtggtctggctggtcggcaccgggcaggtcgcgcccgaccgggtgctcggcctcacc
ttcaccaacaaggccgccggagagctggcggagcgcgtccgtaaggccctcgtcacggcg
ggcatcgtggaccccgacccggatccgggcgccaccgaggaggccgcgggcgagcccgcc
atctccacgtaccacgccttcgccggacagctgctcaaggaccacgggctgcgcgtcggc
ctcgagccgagcgcccggctgctcgccgacgccacccgcttccagctcgccgcgcgcgtc
ctgcgctccgcccccggcccgtatccggcgctcatccgccccttctccgacctggtcacc
gatctgctcgcgctcgacgccgaactcgccgagcacctcgtccccgtggggcggctgcgc
gcgtacgacaccgagctgctgcggacgctggaggggacgcggctgaccaacgaggcgctg
cgcaaggtgcccgaggccgcccgcgcccgccaggagctgctgggcctggtcgaggcgtac
cgcgaggagaagcgccgccgcgatctgctcgacttcggcgaccagatcgcccatgcggcc
accctggcgctcgaccacccggaggtcggccggatcctgcgcgagcagttcgcggtcgtc
ctgctcgacgagtaccaggacacctccgtcgcccagcggctgctgctgtccggtctcttc
ggcggcggcaccggacaccccgtcaccgccgtgggcgacccctgccaggccatctacggc
tggcgcggcgcctccgtggccaacctggacgacttccccgagcacttccggcacgccgac
gacagcccggcgcggcgcttcgcgctcagcgagaaccggcgcagcggcggccgcctcctg
gacctcgccaatgggctggccaccccgctgcgcgcgatgcacgagggcgtcgaggcgctg
cgccccgcgcccggcgccgagcgggacggagcggtgcgctgtgcgctgctgcccacccac
gccgaggagctggcctggctcgccgactccatcgcccacctggtgcgcaccggcaccccg
cccggtgagatcgcggtcctgtgccgtacggcgggtgacttcgcgcagatccagggcgcc
ctggtggaacgggacgttccggtggaggtggtgggcctgtcggggctgctgcatctgccg
gaggtcgccgatctggtggccgtctgcgaggtcctccatgacccgggggccaacgccgcg
ctggtccgtctgctcaccgggccgcgctggcggatcggcccccgcgccctcgcgctgctc
ggccgccgcgcccgcatgctggtctcccacggcggaccggacggggcggaggacgatccc
gaccgacggctcgccgaggccgtggagggcaccgacccctccgaggtgatctccctcgcc
gacgcactcgacaccttcctggaggcgggcggcgggccggacgacgggctgcccttctcc
gccgaggcacgggtccggttcgcccgtctcgcggccgaactccgcgaactgcgccgctcg
ctggccgatccgctgatggacgtgctccaccgggtcctggccaccacgggcctcgaggtc
gagctctccgcctcaccgcacgccctggccgcgcgccgccgcgagacgctcggcaacttc
ctggacgtcgcggccgccttcgcgggccgggatggcggcgcggccgtggacggcgaggcc
accctccagggcttcctcggctttctgcgcaccgccgcgcagtacgagaaggggctcgac
aacgcactccccggcggcgagaacacggtcaaggtgctcaccgcccacaagtccaagggg
ctggagtgggacgtggtggcggcgccggggctggtcgccaagcagttcccgagcgagcag
tcccgcgagtcctggacggcgaacgcgaaggtcctgccccatgagctgcgcggggacgcg
cgaaccctcccggacgtcaccgcctgggacagcaaggggatcgcggccttcaaggacgcc
atgaaggggcatcagcggaccgaggagctgcggctgggctatgtgaccttcacccggccg
cgctcgcttctgctgggctcgggccactggtggggccccacccagaagcggccgcgcggg
ccgtcggccttcctggacgcgctgcgcgagcactgcgaggcggggtacggcgagatcgag
gcatgggccgagccacccgaggagggcgcggagaacccggccctgcgggagtcggcggcc
gaccgggcctggccgctcccgctggacccggccgccctgggccaccggcgccgcgccgcc
gatgtggtgctggcccatctggcgcgcatcgagacggcgggggaggggccgacggcgcgt
gacgaggggcggcccccggctgatggggacccgttcccgaagcccgtggacgacttggag
ccaccggaggagcttgaacccccggaggacccggaggacccggaggaccccgagggcctg
gaggacctggaggcggaggacccggaggatccggagtggtccgagcctccggaggatcct
tacgagggtccttacggagacgcggacgaggggccgtacggggaaggcgaggcggccgag
gacccgtgcgacccgtatgaggacgtgggcgagggcccctacggtgacgcgcagcgcccc
gatcctcacggcgcaccggaccccggtgtgccggatatcacgtgggagccggacgagggc
gagatggcgcccgaggaggcccggctggtcggctcctgggaccgcgatctggacgcgctc
gcgggggagctgcgccgggcccgcgaaactgtgcacgaggtgcttctgccggggacgctc
accgcctcccaactgctgcgcatcgccgccgatccggacggcttcgcgcgggagctggcc
cgccccatgcccaggccgccgcgccccgccgcgcgacggggcacccgtttccacgcctgg
gtcgaatcgcgcttcgaggcgctgccgctgcccttcctcggcccggacgagctgccgggc
ggcgaggacggcgaggcggagatcgccgacgagcgggatctggccgcgctcaaggaggcg
ttcgcccgcacgccgtacgcccgccgcaccccttaccgcgtggaggtgccggtccagctg
accctggcgggacgcatggtccgcggccggatcgacgcggtgtaccgcgagccgggaacg
ggccccgacggcggcccccgctacgagatcgtcgactggaagaccggccgttcccgggac
gccgacccgctccagctggccatctaccgcctcgcctgggccgaacagcacgggttgccc
ctgtctgccgtcacggcggcgttcgtgtacgtgcgcagcggtgaggtggtccgccccgcc
gggctgcccggacgggccggtctcgagcgcatcctgctcggcgagaacggcgacgagccg
gagaacgcaggcggaagcggaaccggagacggagctggagacggaaccggagatggaacc
ggcgacggaaccggagacggagtcggcctcggcgacgcggacgcgaccggaaatgaccat
atcgacgccggaaccgtcaccgagagcgagcgcacatga
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