Streptomyces malaysiensis subsp. malaysiensis CGMCC0516: BV401_30840
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Entry
BV401_30840 CDS
T04980
Name
(GenBank) hypothetical protein
KO
K18197
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
sauo
Streptomyces malaysiensis subsp. malaysiensis CGMCC0516
Brite
KEGG Orthology (KO) [BR:
sauo00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
BV401_30840
Enzymes [BR:
sauo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
BV401_30840
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Gene cluster
GFIT
Motif
Pfam:
RGL11_C
RGI_lyase
FG-GAP_3
FG-GAP
Motif
Other DBs
NCBI-ProteinID:
AQA16591
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Position
complement(7449150..7451054)
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AA seq
634 aa
AA seq
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MPPPDHPPGSAPPRGRTGTARGRMLAAACAAGALTVTSLVSVSEAAEGKGTTPKAAAAAQ
LERLDRGLVSVHTGNDNLVSWRWLATDPNDVTFNLYRGAVKVNSSPITTANYLHKDAPNS
ADYTVRAVVGGVEQPASPSAIQFRPGYYDVPISPPAGGSDYTYEANDASVGDLDGDGDLD
FVLKWQPTNAKDNSQSGVTGNTVVDGYTLQGQRLWRIDLGRNIRSGAHYTQFQVYDYDGD
GQAEIAMKTADGTVDGAGKTIGSASADHRNSSGYVLDGPEYLTMFNGRTGAAMSTVDYVP
PRGTVSSWGDSYGNRVDRFLAGTAYLNGSTPSLIEARGYYTRTVISAWRFSGGQLTRQWT
FDTNSSTNTGKGYDGQGNHALATGDVDGDGRDEIVYGSMAVDDNGAGLWTNKNGHGDAAH
LGDLDPSRPGLEYFKVDEDSAKPGSYFADARTGQVLWSTASGGDNGRGVAGDIWAGSDGA
EMWSARDDQIRDEGGGAKGRKPSSINFLAWWDGDPVRELLDGTHIDKYGTSGDTRLLTGS
GVHSGNGTKATPALSGDILGDWREEVVWPTSDNRALRIYSTPYETDRKITTLLHDRQYRE
ALAWQNTAYNQPPHPSFFIGNKMATPPRPAITTP
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
attccgccccctgatcatccgcccggatccgccccgcccaggggccggacggggacggcc
cgcggccggatgctggccgccgcctgtgcggcgggcgcgctgaccgtcacctcgctggtc
agcgtctcggaggccgccgagggcaaggggaccacgccgaaggcggcggccgcggcccag
ttggagcggctggaccgggggctggtgagcgtgcacaccggcaatgacaacctggtcagc
tggcgctggctggccaccgatccgaacgatgtgacgttcaacctctaccggggcgcggtc
aaggtcaactcctcccccatcaccacggccaactacctccacaaggacgccccgaacagc
gcggactacaccgtgcgggccgtcgtgggcggggtggagcagcccgcctcaccgagcgcg
atccagttccgcccggggtactacgacgtgccgatctcgccgccggcgggcggctcggac
tacacctacgaggccaacgacgcctcggtgggcgacctcgacggcgacggcgacctggac
ttcgtcctcaagtggcagccgaccaacgccaaggacaactcccagtcgggcgtcaccggc
aacaccgtcgtcgacggctacacccttcaggggcagcggctgtggcggatcgacctgggc
cgcaacatccgctccggcgcccactacacccagttccaggtgtacgactacgacggcgac
ggccaggccgagatcgcgatgaagaccgccgacggcacggtcgacggcgccgggaagacc
atcggcagcgcatccgccgaccaccgcaactccagcggctatgtgctcgacgggcccgaa
tacctgacgatgttcaacggccgtacgggcgccgcgatgagcacggtggactatgtcccg
ccgcgcggcaccgtctcctcctggggcgactcctacggcaaccgcgtggaccgcttcctg
gccgggacggcgtatctcaacggctccaccccctcgctgatcgaggcgcgcggctactac
acccgcaccgtgatctccgcctggcggttcagcggtgggcagctcacccgtcagtggacg
ttcgacaccaacagctccaccaacaccggcaagggctacgacggccagggcaaccacgcg
ctggccaccggggatgtggacggcgacggccgggacgagatcgtctacggctcgatggcc
gtggacgacaacggagcggggctgtggacgaacaaaaacggccacggcgacgccgcccac
ctcggcgatctcgacccctcacggccgggcctcgagtacttcaaggtggacgaggactcc
gccaagccgggctcgtacttcgccgacgcccgcaccggccaggtgctgtggtccaccgct
tcgggcggcgacaacgggcgcggcgtggccggcgacatctgggcgggcagcgacggcgcc
gagatgtggtccgcgcgggacgaccagatccgcgacgagggcggcggcgccaagggccgt
aagccctcctcgatcaacttcctggcctggtgggacggcgatccggtgcgcgagctgctg
gacggcacgcatatcgacaagtacggcacctccggtgacacccggctgctcaccggctcc
ggggtgcactccggcaacggcaccaaggccaccccggcgctgtccggcgacatcctcggc
gactggcgcgaggaggtggtctggccgacgagcgacaacagggcgctgcggatctactcc
acgccgtacgagaccgaccggaagatcaccacgctgctccatgaccggcagtaccgcgag
gcgctggcctggcagaacacggcctacaaccagcccccgcaccccagcttcttcatcggc
aacaagatggcgaccccgccgcggcccgccatcaccaccccgtga
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