Streptomyces autolyticus: BV401_38220
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Entry
BV401_38220 CDS
T04980
Name
(GenBank) RNA polymerase subunit sigma
KO
K03090
RNA polymerase sigma-B factor
Organism
sauo
Streptomyces autolyticus
Brite
KEGG Orthology (KO) [BR:
sauo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sauo03021
]
BV401_38220
Transcription machinery [BR:
sauo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BV401_38220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
Sigma70_ECF
HTH_23
HTH_38
HTH_Crp_2
HTH_24
DUF7343
Motif
Other DBs
NCBI-ProteinID:
AQA15380
LinkDB
All DBs
Position
complement(9229674..9230459)
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AA seq
261 aa
AA seq
DB search
MSATATRQRRHDDTPDTGGAFLRLSRLPSGPERDALREAIICAWLPVAKRLALRFRNKGE
NMEDLTQVASLALVKAVDRYNPDLGHAFPSYAIPVITGELKRHFRDYLWTLHIPRNIQEV
RSRTRSARDALEQELGGRTPTVHEICLRTGMPQEDVKAGLEASASCTPLSLNAAVQGAEE
RLLAETVGADDAAIERVVNREALRVLIAELSEQDRYVLYLRFFAGLSQSQIGEILGFSQM
HISRRLSRLYSELRQGLMAYA
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcaaccgcgactcgccaacgacgccatgacgacactcccgacaccggcggtgcc
ttcctgcgtctgtcccggctcccgtccgggcccgaacgcgacgcgctgcgcgaggcgatc
atctgcgcctggctgcccgtcgccaaacgcctggcgctgcgcttccgcaacaagggcgag
aacatggaggacctcacacaggtcgcgtcgctggccctggtgaaggccgtcgaccgctac
aaccccgacctcgggcacgcctttccctcgtatgcgattcccgtcatcaccggtgagctc
aaacgccacttccgtgactatctgtggacgctgcacatcccccgcaacatccaggaggtc
cgctcccgcacccgctccgcacgcgacgcgctggagcaggagctcggcgggcgcaccccc
accgtgcacgagatctgtctgcgcaccggtatgccccaggaggatgtgaaggcgggtctg
gaggccagcgcctcctgcaccccgctctccctcaacgccgcggtgcagggcgccgaggag
cggctgctcgccgagacggtgggcgcggacgacgccgcgatcgaacgcgtcgtcaaccgt
gaggcgctgcgggtgctgatcgccgaactgtcggagcaggaccgctacgtgctctatctg
aggttcttcgccgggctttcgcagagccagatcggcgagatcctcggcttctcccagatg
cacatatcccgcaggctctcccggctctacagcgagctgcggcaagggctcatggcctac
gcctga
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