Staphylococcus aureus subsp. aureus SA40 (CA-MRSA): SA40_0422
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Entry
SA40_0422 CDS
T02849
Symbol
holB
Name
(GenBank) putative DNA polymerase III, delta' subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
saus
Staphylococcus aureus subsp. aureus SA40 (CA-MRSA)
Pathway
saus03030
DNA replication
saus03430
Mismatch repair
saus03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
saus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SA40_0422 (holB)
03430 Mismatch repair
SA40_0422 (holB)
03440 Homologous recombination
SA40_0422 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
saus03032
]
SA40_0422 (holB)
03400 DNA repair and recombination proteins [BR:
saus03400
]
SA40_0422 (holB)
Enzymes [BR:
saus01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SA40_0422 (holB)
DNA replication proteins [BR:
saus03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SA40_0422 (holB)
DNA repair and recombination proteins [BR:
saus03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SA40_0422 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
AGW35469
LinkDB
All DBs
Position
484983..485909
Genome browser
AA seq
308 aa
AA seq
DB search
MDEQQQLTNAYHSNKLSHAYLFEGDDAQTMKQVAINFAKLILCQTDSQCETKVSTYNHPD
FMYISTTENAIKKEQVEQLVRHMNQLPIESTNKVYIIEDFEKLTVQGENSILKFLEEPPD
NTIAILLSTKPEQILDTIHSRCQHVYFKPIDKEKFINRLVEQDMSKPVAEMISTYTTQID
NAMALNEEFDLLALRKSVIRWCELLLTNKPMALIGIIDLLKQAKNKKLQSLTIAAVNGFF
EDIIHTKVNVEDKQIYSDLKNDIDQYAQKLSFNQLILMFDQLTEAHKKLNQNVNPTLVFE
QIVIKGVS
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggatgaacagcaacaattgacgaatgcatatcattcaaataaattatcgcatgcctat
ttatttgaaggtgatgatgcacaaacgatgaaacaagttgcgattaattttgccaagctt
attttatgtcaaacagatagtcaatgtgaaacaaaggttagtacatataatcatccagac
tttatgtatatatcaacaactgagaatgcaattaagaaagaacaagttgaacaacttgtg
cgtcatatgaatcaacttcctatagaaagcacaaataaagtgtacatcattgaagacttt
gaaaagttaactgttcaaggggaaaacagtatcttgaaatttcttgaagaaccaccggac
aatacgattgctattttattgtctacaaaacctgagcaaattttagacacaatccattca
aggtgtcagcatgtatatttcaagcctattgataaagaaaagtttataaatagattagtt
gaacaagacatgtctaagccagtagctgaaatgattagtacttatactacgcaaatagat
aatgcaatggctttaaatgaagaatttgatttattagcattaaggaaatcagttatacgt
tggtgtgaattgttgcttactaataagccaatggcacttataggtattattgatttattg
aaacaggctaaaaataaaaaactgcaatctttaactattgcagctgtgaatggtttcttc
gaagatatcatacatacaaaggtaaatgtagaggataaacaaatatatagtgatttaaaa
aatgatattgatcaatatgcgcaaaagttatcgtttaatcaattaattttgatgtttgat
caactgacggaagcacataagaaattgaatcaaaatgtaaatccaacgcttgtatttgaa
caaatcgtaattaagggtgtgagttag
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