Staphylococcus aureus subsp. aureus SA40 (CA-MRSA): SA40_1838
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Entry
SA40_1838 CDS
T02849
Name
(GenBank) putative helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
saus
Staphylococcus aureus subsp. aureus SA40 (CA-MRSA)
Pathway
saus03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
saus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SA40_1838
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
saus03019
]
SA40_1838
03009 Ribosome biogenesis [BR:
saus03009
]
SA40_1838
Enzymes [BR:
saus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SA40_1838
Messenger RNA biogenesis [BR:
saus03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SA40_1838
Ribosome biogenesis [BR:
saus03009
]
Prokaryotic type
rRNA helicases
SA40_1838
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
AAA_30
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
AGW36882
LinkDB
All DBs
Position
complement(2041957..2043477)
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AA seq
506 aa
AA seq
DB search
MQNFKELGISDNTVQSLESMGFKEPTPIQKDSIPYALQGIDILGQAQTGTGKTGAFGIPL
IEKVVGKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQVVTVFGGMPIERQIKALKKGP
QIVVGTPGRVIDHLNRRTLKTDGIHTLILDEADEMMNMGFIDDMRFIMDKIPAVQRQTML
FSATMPKAIQALVQQFMKSPKIIKTMNNEMSDPQIEEFYTIVKELEKFDTFTNFLDVHQP
ELAIVFGRTKRRVDELTSALISKGYKAEGLHGDITQAKRLEVLKKFKNDQINILVATDVA
ARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFVNPIEMDYIRQIEDANG
RKMSALRPPHRKEVLQAREDDIKEKVENWMSKESESRLKRISTELLNEYNDVDLVAALLQ
ELVEANDEVEVQLTFEKPLSRKGRNGKPSGSRNRNSKRGNPKFDSKSKRSKGYSSKKKST
KKFDRKEKSSGGSRPMKGRTFADHQK
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaaattttaaagaactagggatttcggataatacggttcagtcacttgaatcaatg
ggatttaaagagccgacacctatccaaaaagacagtatcccttatgcgttacaaggaatt
gatatccttgggcaagctcaaaccggtacaggtaaaacaggagcattcggtattccttta
attgagaaagtagtagggaaacaaggggttcaatcgttgattttagcacctacaagagaa
ttggcaatgcaggtagctgaacaattaagagaatttagccgtggacaaggtgtccaagtt
gttactgtattcggtggtatgcctatcgaacgccaaattaaagccttgaaaaaaggccca
caaatcgtagtcggaacacctgggcgtgttatcgaccatttaaatcgtcgcacattaaaa
acggacggaattcatactttgattttagatgaagctgatgaaatgatgaatatgggattc
atcgatgatatgagatttattatggataaaattccagcagtacaacgtcaaacaatgttg
ttctcagctacaatgcctaaagcaatccaagctttagtacaacaatttatgaaatcacca
aaaatcattaagacaatgaataatgaaatgtctgatccacaaatcgaagaattctataca
attgttaaagaattagagaaatttgatacatttacaaatttcctagatgttcatcaacct
gaattagcaatcgtattcggacgtacaaaacgtcgtgttgatgaattaacaagtgctttg
atttctaaaggatataaagctgaaggcttacatggtgatattacacaagcgaaacgttta
gaagtattaaagaaatttaaaaatgaccaaattaatattttagtcgctactgatgtagca
gcaagaggactagatatttctggtgtgagtcatgtttataactttgatatacctcaagat
actgaaagctatacacaccgtattggtcgtacgggtcgtgctggtaaagaaggtatcgcg
gtaacatttgtaaatccaattgaaatggattacattagacaaattgaagatgctaatggt
agaaaaatgagcgcacttcgtccaccacatcgtaaagaagtacttcaagcacgtgaagat
gacatcaaagaaaaagttgaaaactggatgtctaaagagtcagaatcacgcttgaaacgc
atttctacagagttgttaaatgaatataacgatgttgatttagttgctgcacttttacaa
gagttagtagaagcgaacgatgaagttgaagttcaattaacttttgaaaaaccattatct
cgcaaaggccgtaacggtaaaccaagtggttctcgtaacagaaatagtaagcgtggtaat
cctaaatttgacagtaagagtaaacgttcaaaaggatactcaagcaagaagaaaagtact
aaaaaattcgaccgtaaagagaagagcagcggtggaagcaggcctatgaaaggtcgcaca
tttgctgaccatcaaaaataa
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