Staphylococcus aureus subsp. aureus SA957 (CA-MRSA): SA957_1163
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Entry
SA957_1163 CDS
T02850
Name
(GenBank) ribonuclease J 2
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
sauu
Staphylococcus aureus subsp. aureus SA957 (CA-MRSA)
Pathway
sauu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sauu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SA957_1163
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sauu03019
]
SA957_1163
Messenger RNA biogenesis [BR:
sauu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SA957_1163
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
vATP-synt_E
HTH_10
Imm49
Motif
Other DBs
NCBI-ProteinID:
AGW33660
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Position
1276147..1277820
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AA seq
557 aa
AA seq
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MSLIKKKNKDIRIIPLGGVGEIAKNMYIVEVDDEMFMLDAGLMFPEDEMLGIDIVIPDIS
YVLENKDKLKGIFLTHGHEHAIGAVSYVLEQLDAPVYGSKLTIALIKENMKARNIDKKVR
YYTVNNDSIMRFKNVNISFFNTTHSIPDSLGVCIHTSYGAIVYTGEFKFDQSLHGHYAPD
IKRMAEIGEEGVFVLISDSTEAEKPGYNTPENVIEHHMYDAFAKVRGRLIVSCYASNFIR
IQQVLNIASKLNRKVSFLGRSLESSFNIARKMGYFDIPKDLLIPITEVDNYPKNEVIIIA
TGMQGEPVEALSQMAQHKHKIMNIEEGDSVFLAITASANMEVIIANTLNELVRAGAHIIP
NNKKIHASSHGCMEELKMMINIMKPEYFIPVQGEFKMQIAHAKLAAEAGVAPEKIFLVEK
GDVINYNGKDMILNEKVNSGNILIDGIGIGDVGNIVLRDRHLLAEDGIFIAVVTLDPKNR
RIAAGPEIQSRGFVYVRESEDLLREAEEKVREIVEAGLQEKRIEWSEIKQNMRDQISKLL
FESTKRRPMIIPVISEI
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
ttgagtttaataaagaaaaagaataaagatattcgcattataccattaggcggtgttggc
gaaattgctaaaaatatgtatatcgttgaagtagacgatgaaatgtttatgttagatgct
ggacttatgtttccagaagacgaaatgctaggtattgatattgttataccagacatttca
tacgtacttgaaaataaagataaattgaaggggatattccttacacacggacatgagcac
gcgattggtgcagtgagttatgttttagaacaattagatgcaccagtatatggatctaaa
ttgacaatagcgttaattaaagaaaatatgaaagcccgtaatattgataaaaaagttcgc
tactacacagttaataatgattcaattatgagattcaaaaacgtgaatattagtttcttt
aatacgacacacagtattcctgatagtttaggtgtttgtattcacacttcatatggtgcc
attgtgtatactggtgaatttaagtttgaccaaagtttacatggacattatgcaccagat
attaaacgtatggcagagattggtgaagaaggcgtatttgtcttaatcagtgattctact
gaggcagagaaacctggatataatactccggaaaatgtgattgaacatcatatgtatgat
gcttttgcaaaagtgcgaggtcgcttgatagtttcatgttatgcttcgaactttatacgt
attcagcaagttttaaatattgctagcaagctaaatcgtaaagtgtcatttttaggaaga
tcacttgaaagttcatttaatattgctcgtaaaatggggtatttcgacattcctaaagat
ttgctaattcctataacagaagttgataattatcctaaaaatgaagtaataattatagct
actggtatgcaaggagaacctgtagaagccttaagtcaaatggcgcaacataagcataaa
attatgaatatcgaagaaggtgattctgtatttttagcaattacggcttctgctaatatg
gaagttatcattgcgaatacattaaatgagcttgtacgtgctggcgcacatattattcca
aataacaagaagattcatgcttcaagtcatggttgcatggaagaattaaaaatgatgatt
aatattatgaaacctgaatactttattcctgtacaaggtgaatttaaaatgcagatagca
catgcgaagctagcagctgaagcaggtgttgcaccagaaaagattttccttgtggaaaaa
ggagatgtcattaattacaacggtaaagatatgatattaaatgaaaaggtaaattcagga
aatattttaatagatggtattggtattggggatgtaggaaatatcgtgttgagagaccgc
catcttttagcagaagatggtatctttattgctgtagtaacgttagatcctaaaaataga
cgtatagctgcgggacctgaaattcaatctcgtggatttgtatatgtacgtgaaagtgaa
gacttattacgtgaagcagaagagaaagtacgtgaaatagtagaagctggtttacaagaa
aaacgcatagaatggtctgaaattaagcaaaatatgcgtgatcaaattagtaaactatta
ttcgaaagtacaaaacgtcgtcctatgattattccagtaatttctgaaatttaa
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