Staphylococcus aureus subsp. aureus ST228/18583 (MRSA): SAI8T7_1004150
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Entry
SAI8T7_1004150 CDS
T03150
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
sauy
Staphylococcus aureus subsp. aureus ST228/18583 (MRSA)
Pathway
sauy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sauy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SAI8T7_1004150 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sauy03021
]
SAI8T7_1004150 (rpoC)
03400 DNA repair and recombination proteins [BR:
sauy03400
]
SAI8T7_1004150 (rpoC)
Enzymes [BR:
sauy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SAI8T7_1004150 (rpoC)
Transcription machinery [BR:
sauy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SAI8T7_1004150 (rpoC)
DNA repair and recombination proteins [BR:
sauy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SAI8T7_1004150 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
CCJ24134
UniProt:
A0A7U7EXT4
LinkDB
All DBs
Position
559423..563019
Genome browser
AA seq
1198 aa
AA seq
DB search
MKIGLASPEKIRSWSFGEVKKPETINYRTLKPEKDGLFCERIFGPTKDWECSCGKYKRVR
YKGMVCDRCGVEVTKSKVRRERMGHIELAAPVSHIWYFKGIPSRMGLLLDMSPRALEEVI
YFASYVVVDPGPTGLEKKTLLSEAEFRDYYDKYPGQFVAKMGAEGIKDLLEEIDLDEELK
LLRDELESATGQRLTRAIKRLEVVESFRNSGNKPSWMILDVLPIIPPEIRPMVQLDGGRF
ATSDLNDLYRRVINRNNRLKRLLDLGAPGIIVQNEKRMLQEAVDALIDNGRRGRPVTGPG
NRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIAVGPSLKMYQCGLPKEMALELFKPF
VMKELVQREIATNIKNAKSKIERMDDEVWDVLEEVIREHPVLLNRAPTLHRLGIQAFEPT
LVEGRAIRLHPLVTTAYNADFDGDQMAVHVPLSKEAQAEARMLMLAAQNILNPKDGKPVV
TPSQDMVLGNYYLTLERKDAVNTGAIFNNTNEVLKAYANGFVHLHTRIGVHASSFNNPTF
TEEQNKKILATSVGKIIFNEIIPDSFAYINEPTQENLERKTPNRYFIDPTTLGEGGLKEY
FENEELIEPFNKKFLGNIIAEVFNRFSITDTSMMLDRMKDLGFKFSSKAGITVGVADIVV
LPDKQQILDEHEKLVDRITKQFNRGLITEEERYNAVVEIWTDAKDQIQGELMQSLDKTNP
IFMMSDSGARGNASNFTQLAGMRGLMAAPSGKIIELPITSSFREGLTVLEYFISTHGARK
GLADTALKTADSGYLTRRLVDVAQDVIVREEDCGTDRGLLVSDIKEGTEMIEPFIERIEG
RYSKETIRHPETDEIIIRPDELITPEIAKKITDAGIEQMYIRSAFTCNARHGVCEKCYGK
NLATGEKVEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVAGSDITQGLPRIQEIFEARNP
KGQAVITEIEGVVEDIKLAKDRQQEIVVKGANETRSYLASGTSRIIVEIGQPVQRGEVLT
EGSIEPKNYLSVAGLNATESYLLKEVQKVYRMQGVEIDDKHVEVMVRQMLRKVRIIEAGD
TKLLPGSLVDIHNFTDANREAFKHRKRPATAKPVLLGITKASLETESFLSAASFQETTRV
LTDAAIKGKRDDLLGLKENVIIGKLIPAGTGMRRYSDVKYEKTAKPVAEVESQTEVTE
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataggattggcttcacctgaaaaaatccgttcttggtcttttggtgaagttaaa
aaacctgaaacaatcaactaccgtacattaaaacctgaaaaagatggtctattctgtgaa
agaattttcggacctacaaaagactgggaatgtagttgtggtaaatacaaacgtgttcgc
tacaaaggcatggtctgtgacagatgtggagttgaagtaactaaatctaaagtacgtcgt
gaaagaatgggtcacattgaacttgctgctccagtttctcacatttggtatttcaaaggt
ataccaagtcgtatgggattattacttgacatgtcaccaagagcattagaagaggttatt
tactttgcttcttatgttgttgtagatccaggtccaactggtttagaaaagaaaacttta
ttatctgaagctgaattcagagattattatgataaatacccaggtcaattcgttgcaaaa
atgggtgcagaaggtattaaagatttacttgaagagattgatcttgacgaagaacttaaa
ttgttacgcgatgagttggaatcagctactggtcaaagacttactcgtgcaattaaacgt
ttagaagttgttgaatcattccgtaattcaggtaacaaaccttcatggatgattttagat
gtacttccaatcatcccaccagaaattcgtccaatggttcaattagatggtggacgattt
gcaacaagtgacttaaacgacttataccgtcgtgtaattaatcgaaataatcgtttgaaa
cgtttattagatttaggtgcacctggtatcatcgttcaaaacgaaaaacgtatgttacaa
gaagccgttgacgctttaattgataatggtcgtcgtggtcgtccagttactggcccaggt
aaccgtccattaaaatctttatctcatatgttaaaaggtaaacaaggtcgtttccgtcaa
aacttacttggtaaacgtgtcgactattcaggacgttcagttattgcagtaggtccaagc
ttgaaaatgtaccaatgtggtttaccaaaagaaatggcacttgaactatttaaaccattc
gtaatgaaagaattagttcaacgtgaaattgcaactaacattaaaaatgcgaagagtaaa
atcgaacgtatggatgatgaagtttgggacgtattggaagaagtaattagagaacatcct
gtattacttaaccgtgcaccaacacttcatagacttggtattcaagcatttgaaccaact
ttagttgaaggtcgtgcgattcgtctacatccacttgtaacaacagcttataatgctgac
tttgacggtgaccaaatggcggttcacgttcctttatcaaaagaggcacaagctgaagca
agaatgttgatgttagcagcacaaaacatcttgaaccctaaagatggtaaacctgtagtt
acaccatcacaagatatggtacttggtaactattaccttactttagaaagaaaagatgca
gtaaatacaggcgcaatctttaataatacaaatgaagtattaaaagcatatgcaaatggc
tttgtacatttacacactagaattggtgtacatgcaagttcgttcaataatccaacattt
actgaagaacaaaacaaaaagattcttgctacgtcagtaggtaaaattatattcaatgaa
atcattccagattcatttgcttatattaatgaacctacgcaagaaaacttagaaagaaag
acaccaaacagatatttcatcgatcctacaactttaggtgaaggtggattaaaagaatac
tttgaaaatgaagaattaattgaacctttcaacaaaaaattcttaggtaatattattgca
gaagtattcaacagatttagcatcactgatacatcaatgatgttagaccgtatgaaagac
ttaggattcaaattctcatctaaagctggtattacagtaggtgttgctgatatcgtagta
ttacctgataagcaacaaatacttgatgagcatgaaaaattagtcgacagaattacaaaa
caattcaaccgtggtttaatcactgaagaagaaagatataatgcagttgttgaaatttgg
acagatgcaaaagatcaaattcaaggtgaattgatgcaatcacttgataaaactaaccca
atcttcatgatgagtgattcaggtgcccgtggtaacgcatctaactttacacagttagca
ggtatgcgtggattgatggccgcaccatctggtaagattatcgaattaccaatcacatct
tcattccgtgaaggtttaacagtacttgaatacttcatctcaactcacggtgcacgtaaa
ggtcttgccgatacagcacttaaaacagctgactcaggatatcttactcgtcgtcttgtt
gacgtggcacaagatgttattgttcgtgaagaagactgtggtactgatagaggtttatta
gtttctgatattaaagaaggtacagaaatgattgaaccatttatcgaacgtattgaaggt
cgttattctaaagaaacaattcgtcatcctgaaactgatgaaataatcattcgtcctgat
gaattaattacacctgaaattgctaagaaaattacagatgctggtattgaacaaatgtat
attcgctcagcatttacttgtaacgcacgacatggtgtttgtgaaaaatgttacggtaaa
aaccttgctactggtgaaaaagttgaagttggtgaagcagttggtacaattgcagcccaa
tctatcggtgaaccaggtacacagcttacaatgcgtacattccatacaggtggggtagca
ggtagcgatatcacacaaggtcttcctcgtattcaagagattttcgaagcacgtaaccct
aaaggtcaagcggtaattacggaaatcgaaggtgtcgtagaagatattaaattagcaaaa
gatagacaacaagaaattgttgttaaaggtgctaatgaaacaagatcataccttgcttca
ggtacttcaagaattattgtagaaatcggtcaaccagttcaacgtggtgaagtattaact
gaaggttctattgaacctaagaattacttatctgttgctggattaaacgcgactgaaagc
tacttattaaaagaagtacaaaaagtttaccgtatgcaaggtgtagaaatcgacgataaa
cacgttgaggttatggttcgacaaatgttacgtaaagttagaattatcgaagcaggtgat
acgaagttattaccaggttcattagttgatattcataactttacagatgcaaatagagaa
gcatttaaacaccgtaagcgtcctgcaacagctaaaccagtattacttggtattactaaa
gcatcacttgaaacagaaagtttcttatctgcagcatcattccaagaaacaacaagagtt
cttacagatgcagcaattaaaggtaagcgtgatgacttattaggtcttaaagaaaacgta
attattggtaagttaattccagctggtactggtatgagacgttatagcgacgtaaaatac
gaaaaaacagctaaaccagttgcagaagttgaatctcaaactgaagtaacggaataa
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