Staphylococcus aureus subsp. aureus Mu50 (MRSA/VISA): SAV1275
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Entry
SAV1275 CDS
T00052
Name
(GenBank) similar to metallo-beta-lactamase family protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
sav
Staphylococcus aureus subsp. aureus Mu50 (MRSA/VISA)
Pathway
sav03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SAV1275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sav03019
]
SAV1275
Messenger RNA biogenesis [BR:
sav03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SAV1275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
vATP-synt_E
HTH_10
Imm49
Motif
Other DBs
NCBI-ProteinID:
BAB57437
UniProt:
Q99UJ7
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All DBs
Position
1345104..1346777
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AA seq
557 aa
AA seq
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MSLIKKKNKDIRIIPLGGVGEIAKNMYIVEVDDEMFMLDAGLMFPEDEMLGIDIVIPDIS
YVLENKDKLKGIFLTHGHEHAIGAVSYVLEQLDAPVYGSKLTIALIKENMKARNIDKKVR
YYTVNNDSIMRFKNVNISFFNTTHSIPDSLGVCIHTSYGAIVYTGEFKFDQSLHGHYAPD
IKRMAEIGEEGVFVLISDSTEAEKPGYNTPENVIEHHMYDAFAKVRGRLIVSCYASNFIR
IQQVLNIASKLNRKVSFLGRSLESSFNIARKMGYFDIPKDLLIPITEVDNYPKNEVIIIA
TGMQGEPVEALSQMAQHKHKIMNIEEGDSVFLAITASANMEVIIANTLNELVRAGAHIIP
NNKKIHASSHGCMEELKMMINIMKPEYFIPVQGEFKMQIAHAKLAAEAGVAPEKIFLVEK
GDVINYNGKDMILNEKVNSGNILIDGIGIGDVGNIVLRDRHLLAEDGIFIAVVTLDPKNR
RIAAGPEIQSRGFVYVRESEDLLREAEEKVREIVEAGLQEKRIEWSEIKQNMRDQISKLL
FESTKRRPMIIPVISEI
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
ttgagtttaataaagaaaaagaataaagatattcgcattataccattaggcggtgttggc
gaaattgctaaaaatatgtatatcgttgaagtagacgatgaaatgtttatgttagatgct
ggacttatgtttccagaagacgaaatgctaggtattgatattgttataccagacatttca
tacgtacttgaaaataaagataaattgaagggtatattccttacacacggacatgagcac
gcgattggtgcagtgagttatgttttagaacaattagatgcaccagtatatggatctaaa
ttgacaatagcgttaattaaagaaaatatgaaagcccgtaatattgataaaaaagttcgc
tactacacagttaacaatgattcaattatgagattcaaaaacgtgaatattagtttcttt
aatacgacacacagtattcctgatagtttaggtgtttgtattcacacttcatatggtgcc
attgtgtatacaggtgaatttaagtttgaccaaagtttacatggacattatgcaccagat
attaaacgtatggcagagattggtgaagaaggcgtatttgtcttaatcagtgattctact
gaggcagagaaacctggatataatactccggaaaatgtaattgaacatcatatgtatgat
gcttttgcaaaagtgcgaggtcgcttgattgtttcatgttatgcttcgaactttatacgt
attcagcaagttttaaatattgctagcaagctaaatcgtaaagtgtcatttttaggaaga
tcacttgaaagttcatttaatattgctcgtaaaatggggtatttcgacattcctaaagat
ttgctaattcctataacagaagttgataattatcctaaaaatgaagtgataattatagct
actggtatgcaaggagaacctgtagaagccttaagtcaaatggcgcaacataagcataaa
attatgaatatcgaagaaggcgattctgtatttttagcaattacggcttctgctaatatg
gaagttatcattgcgaatacattaaatgagcttgtacgtgctggcgcacatattattcca
aataacaagaagattcatgcttcaagtcatggttgcatggaagaattaaaaatgatgatt
aatattatgaaacctgaatactttattcctgtacaaggtgaatttaaaatgcagatagca
catgcgaagctagcagctgaagcaggtgttgcaccggaaaagattttccttgtggaaaaa
ggagatgtcattaattacaacggtaaagatatgatattaaatgaaaaggtaaattcggga
aatattttaatagatggtattggtattggggatgtaggaaatatcgtgttgagagaccgt
catcttttagcagaagatggtatctttattgctgtagtaacgttagatcctaaaaataga
cgtatagctgcgggtcctgaaattcaatctcgtgggtttgtatatgtacgtgaaagtgaa
gacttattacgtgaagcagaagagaaagtacgtgaaatagtagaagctggtttacaagaa
aaacgcatagaatggtctgaaattaagcaaaatatgcgtgatcaaattagtaaactatta
ttcgaaagtacaaaacgtcgtcctatgattattccagtaatttctgaaatttaa
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