Shewanella avicenniae: JYB87_00255
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Entry
JYB87_00255 CDS
T07845
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
savi
Shewanella avicenniae
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
JYB87_00255
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
YqgF
HHH_7
S1_RRP5
T2SSK
HHH_6
RNase_II_C_S1
RuvX
Motif
Other DBs
NCBI-ProteinID:
QSX33730
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Position
50807..53152
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AA seq
781 aa
AA seq
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MHNIAEIIAQELQVREQQVAATITLLDEGATVPFIARYRKEVTGGLDDTQLRTLYSRLGY
LRELNERRQVIITSIEAQGKLTPELQRALNDADTKTRLEDLYLPYKPKRRTKGQIAIEAG
IEPLADKLFAAAGDDSVMPELEAEAFLNPEASFADAKVVLDGARYILMERFAEDAELLAK
VRRYIADNAVIESKLVSGKEKDGAKFRDYFEHTEPLASVPSHRALAMLRGRNEGVLALNI
NADPNNDGSGSYCEQIIADHQRLSLSDSAIDSWLRTVVTATWRIKIALQMETEFIGQMRE
VAESEAIKVFARNLGDLLMAAPAGAKATMGLDPGLRTGVKVALVNDTGKLVAHTTIFPHA
PQNQWDKSVRTLANLVKMHSIELIAIGNGTASRETDRLAAEVIAEVKAEVPSLTKVVVSE
AGASVYSASELAANEFPDLDVSLRGAVSIARRLQDPLAELVKIEPKSIGVGQYQHDVSQS
QLSSSLEAVVEDCVNSVGVDVNMASVPLLSQVAGLNRTLAKNIVDFRDANGRFNSRKELL
GVPRLGPKAFEQAAGFLRIRDGQNPLDASAVHPEAYKLVEQIADAKNSPVAELIGNSSVL
NAINPSEFTTAEFGLPTISDILKELDKPGRDPRGEFKTATFKEGVEEIKDLRPEMILEGV
VTNVTNFGAFVDIGVHQDGLVHISSLTDKFVSDPHSVVKAGDVVKVKVMEVDVERRRIGL
TMRLDEQPAEKTAAPARNDKAAKPHKPNQGQAKPQKRPEKPKQVNAAMGNAFAEAFAKLK
K
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgcacaatattgctgaaataatcgctcaagagctgcaggttcgtgagcagcaagtagcc
gcaactatcacgctgttagatgaaggcgcaaccgtgccgtttatcgcgcgttaccgtaaa
gaagtcaccggcggcttagatgatacccaactgcgtactctttatagtcgcttgggctat
ctgcgcgaacttaatgagcgtcgtcaggtgatcatcacctcgattgaggcgcaggggaaa
ttgacccccgagttacaacgcgcattaaacgatgccgacaccaaaactcgcctcgaagat
ctctatctgccttataaaccaaagcgccgtaccaaaggccaaatcgccatcgaagcgggc
atcgagccgttggcagacaaattgtttgctgccgcgggcgacgactcggtgatgcctgag
ctagaagccgaggctttcttgaaccctgaagccagcttcgctgatgccaaagtcgtatta
gatggcgcgcgctatattctgatggagcgctttgccgaagatgccgagctactggcgaag
gtgcgccgttatattgccgataacgccgtcattgaaagcaagttggtctcaggtaaagag
aaggacggtgccaagttccgcgattattttgaacatacagaaccgctggccagcgtgcct
tctcatcgcgcgttagctatgttgcgtggtcgcaatgaaggcgtgttagcgctcaacatc
aatgccgatcctaacaatgacggcagtggtagttattgcgaacagatcatcgcggaccat
caacgtctgtcgctgagtgatagcgctattgatagctggttgcgcacggtcgtaacagcg
acttggcgaatcaagattgcgctgcagatggaaactgaatttatcggccagatgcgtgaa
gtggcggaaagtgaagccattaaagtgtttgcccgtaatttgggcgatttgctgatggca
gctcctgcaggcgccaaagccaccatggggctcgaccccggcttacgcactggggttaaa
gtggcattggtgaacgataccggcaagctggtggcccacaccaccattttcccgcatgca
ccgcaaaatcagtgggataaatctgtgcgtactttggctaatctggtcaaaatgcacagc
attgagctgattgcgattggtaacggtaccgcgtcgcgcgaaacggatcgtttagccgcc
gaagtgattgccgaagtgaaagctgaagtgccgagcttgaccaaagtagtggtgagcgaa
gcgggggcatcggtgtactctgcatctgaattggctgccaatgaatttccagatctcgat
gtgtcgttgcgtggcgcagtatctatcgcccgacgtctgcaagatccgctggccgagctg
gtaaaaatcgagccgaaatcgattggggtggggcaatatcagcatgacgtgagccaaagt
cagctgtcatcgtcactcgaagccgtggtggaagactgtgttaacagcgtaggtgtggat
gtcaacatggcgtcagtacccttgcttagtcaagtggctgggctaaaccgcacgctggca
aaaaacattgtcgattttcgtgatgcaaacggccgctttaatagccgcaaagagttgctc
ggcgtaccgcgcttagggccaaaagcctttgagcaagctgctggctttttgcgtattcgc
gatggtcaaaacccgttagatgcctctgccgtgcaccctgaagcttataagctggtggag
cagatcgccgatgcgaaaaatagcccagtggccgagttgattggcaactcaagcgtgctt
aatgcgatcaatccgagcgaatttactaccgctgaatttggcctgcccaccatcagcgat
attttgaaagagttggataagccgggaagagatccgcgcggtgaatttaaaacggcgacc
tttaaagaaggcgttgaagagatcaaagacctacgcccagagatgattctggaaggcgta
gtcaccaacgtgaccaactttggtgcctttgtagatatcggtgtacatcaagacggctta
gtgcatatctcgtcattgaccgataaatttgtcagtgacccgcactcagtggtgaaagcg
ggcgatgtggtcaaagtgaaggtgatggaagttgacgttgagcgccgccgtatcggtttg
acgatgcgcttggatgaacagcctgctgaaaaaacagccgcgccagcacggaatgataaa
gccgcgaaaccgcataaaccaaatcaaggccaagcgaaaccgcaaaagcgcccggaaaag
ccgaaacaggtcaatgcggcaatgggaaatgcatttgctgaggcgtttgccaaactgaag
aaataa
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