KEGG   Shewanella avicenniae: JYB87_00395
Entry
JYB87_00395       CDS       T07845                                 
Name
(GenBank) type I restriction endonuclease subunit R
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
savi  Shewanella avicenniae
Brite
KEGG Orthology (KO) [BR:savi00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:savi02048]
    JYB87_00395
Enzymes [BR:savi01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     JYB87_00395
Prokaryotic defense system [BR:savi02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   JYB87_00395
SSDB
Motif
Pfam: T1RH-like_C SWI2_SNF2 HSDR_N T1R_D3-like ResIII DEAD AAA_22
Other DBs
NCBI-ProteinID: QSX35365
LinkDB
Position
complement(82656..85877)
AA seq 1073 aa
MTEDQLEQLCLDWFQEVGYQYQNGYDIAPDGDSPERDDYHQVILHQRLVDCLSTINPDLP
TDTLIEVAKIVTTPQTPVLIKNNKAFHKFLIEGVPIEYSVIEAGQWVTKHTHVRLMDFEH
PENNQFLVVNQFTITGTKINRRPDVVVFINGLPIAVIELKNPADDHADIWNAYNQIQTYK
DEIADLFVFNEAIVISDGWTARVGSLTANKERFLPWKTIESEDDKPLWEYQLETMVRGFF
KPELLLDYIRYFVLFENDSDKIIKKIAGYHQFHAVRAAVQATVTAAVTPSSSTERSASYA
NRVAPGSKKAGVVWHTQGSGKSISMVCYASKLLQQPEMNNPTLVVVTDRNDLDGQLFNTF
TMAQETLKQIPQQAEDRDSLRELLLNRQSGGIIFTTVQKFALVDEELAHPILSERANIVV
VSDEAHRSQYGNKARLTEVKDENGKVTGQRYVYGYSKYMRDALPNAAFIGFTGTPISLDD
KDTRGVFGDYVSIYDIQDAVSDGATVPIYYESRLAKLDIKQDEIEALNDQIEDEIGEDEE
TDAREKIKSQWSALEKLVGAEPRIKQVAQDLVEHFTTRCATFPGKAMIVAMSREICVDLY
NAIVAIKPEWHSDDPNKGAIKIVMTGSAADKEKMQPHIHDKKTKKLFEKRYKDTEDELQL
VIVRDMWLTGFDAPCCHTMYIDKPMKGHNLMQAIARVNRVFKDKPGGLVVDYIGIANELK
NALKTYTNSQGKGQPTVDTAEAFAVLMEKIDIVRGMFATPVDGAVFKYRPEFETKPLQLL
PGAANHISGLSHKNAKGEDVRDGKRRFLDVMVAMMKALSLCSTMDEVAGYRIEIAFYGAI
KTAFLKHSTVDKKRSDELRNSALRQILNNAIVADGVDDIFKTVGLDKPNIGLLSEEFLED
VKNMKEKNLAVELLEKLLRDEVKARMKNDVVQEKKYSDRILSTLQKYHNRNIETAQVIEE
LIQWAKEMQADADMMDKLNLSTDEMAFYRALVINEASVRVLGDDNLRQLAIELTNQLRKS
ATVDWQKRESVRARMRNLVRRLLKRWGYPPEQSDGAIKLVLEQAEVLADGWYN
NT seq 3222 nt   +upstreamnt  +downstreamnt
atcactgaagatcaacttgagcagctgtgtcttgattggtttcaagaggtaggttaccaa
tatcaaaatggctatgacattgcccctgatggcgactcgcctgaacgggacgattatcat
caggtgatattacatcaacgtctcgttgattgtttgagcacgataaaccctgacttaccg
actgatacgctcatagaagtcgcgaaaatcgttaccacgccgcaaacgcctgtgcttatc
aaaaataacaaggcgtttcacaagttcctcatcgaaggcgtgcccattgagtattctgtg
attgaggctggccaatgggtcaccaagcatactcatgtacggctcatggattttgaacac
cctgagaacaatcagtttctggtggtcaatcaatttacaataaccggcactaaaatcaac
cgcagacccgatgtcgtggtgtttattaatggcttaccaattgccgttatagagttaaag
aacccagctgatgatcatgcagatatatggaatgcgtataaccagatccaaacctataaa
gacgaaattgccgatctattcgtgttcaatgaggcgattgttatttctgatggttggacc
gcgcgagtcggctccttaactgccaataaagagcgttttctgccatggaaaaccattgaa
agtgaagacgataaaccactatgggaataccaattagaaaccatggtacgtggtttcttt
aagccggaactgctgcttgattacattcgctatttcgttctttttgaaaatgatagcgat
aaaatcattaagaaaattgccggttaccaccaattccatgcggtaagagccgccgttcaa
gcaactgtcaccgcagcggtaacgcctagttcttcaacggaacgtagcgcgagttacgca
aaccgagtggctcccggtagcaaaaaggcgggggtagtttggcatacccaaggtagtggt
aagagtatttcaatggtgtgttatgccagtaaactgctacaacaaccagaaatgaataat
cccacattagtggttgttactgaccgcaatgacttggatggccagctattcaacaccttc
acgatggcgcaagaaacgctcaaacaaattccacagcaagctgaagaccgcgactcattg
cgtgaattactgctcaatcgtcaatcaggcggcatcatttttaccacggtacagaagttt
gcacttgtcgatgaagaattagcgcatcctattttgtccgaacgcgccaatattgttgtt
gtttctgatgaagcgcatcgtagccagtatggcaataaggcccgcttgacggaggtcaaa
gacgaaaacggcaaagtcaccggccaacgttatgtttatggttactcgaaatacatgcgc
gatgccttgccaaatgcggcctttatcggtttcaccggtacgccgatttcacttgatgat
aaagatacccgcggcgtgtttggtgattatgtctcgatctacgatattcaagatgcggtg
agtgatggtgccacggtgccgatttactatgaatcacgccttgccaaactcgacattaag
caagatgaaattgaagcgttgaatgaccaaatcgaagacgagattggtgaggatgaagaa
accgatgctcgcgaaaaaatcaaatcacaatggtctgcactggagaaactggttggcgca
gagccgcgaattaagcaagtagcacaggatctggtcgaacattttacaactcgttgtgcc
accttcccaggtaaagccatgatagttgcgatgagccgagaaatttgcgtggatttatac
aatgcaattgtagccatcaaaccagagtggcacagcgatgatcccaataaaggtgctatt
aaaattgtcatgaccgggagtgcggcggacaaagagaaaatgcagccgcacattcatgac
aagaaaactaaaaagctatttgaaaaacgatataaagacactgaagacgagctgcaattg
gtgatcgtgcgagacatgtggctgaccggctttgatgcaccttgttgccataccatgtat
atcgacaagccgatgaaaggccataatttgatgcaggctattgctcgggttaaccgcgta
ttcaaagataagcccggcggcttagttgtcgattatatcggtattgccaatgaactgaaa
aatgccctcaaaacctacacgaatagccaaggaaagggacaaccgaccgtcgatacggcg
gaagcttttgcagtgttgatggaaaaaatcgatattgtcagaggaatgtttgcaacaccg
gtagatggcgcggtgtttaagtatcgacctgagtttgaaactaaacctcttcaactatta
cctggagccgctaaccatatttctgggcttagccacaaaaatgctaaaggagaggacgtg
cgtgatggtaagcggcgtttcctcgacgtcatggtggcaatgatgaaagcattgtcgctg
tgtagcactatggatgaagtagcaggctatagaattgaaatagcgttctatggtgctatt
aagaccgcattcctgaaacactcaacggttgataaaaagcgcagtgacgagctgcgtaac
tcagcgttacggcaaattctcaataatgccattgttgctgatggcgttgatgatattttc
aagacagtcggcttggacaagccaaatatcggtttgctttctgaagagtttctcgaagat
gtgaagaacatgaaagagaagaacctcgctgttgagttgttggaaaaattactgcgtgat
gaagtaaaagcgcggatgaaaaacgatgttgtgcaagagaaaaagtactctgaccgtatc
ctgtccacactacagaaataccataaccgaaacatcgaaacggctcaggtaattgaagag
ttgatccaatgggcaaaagagatgcaggccgacgccgacatgatggataagctgaatctt
tcgacggatgaaatggcgttctatcgtgcattggtgataaacgaagcctcggtacgtgtt
ctcggtgacgataacctgcgccagcttgcaatagagttaacaaatcaactccgaaaatct
gctaccgttgactggcagaagcgcgagagtgttcgcgcaagaatgcggaatctggttcga
cgtctattaaaacgctggggatatccacctgaacaatcagatggtgcaatcaagttggtg
ctggaacaagctgaagtactcgccgacggatggtacaactaa

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