Shewanella avicenniae: JYB87_00700
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Entry
JYB87_00700 CDS
T07845
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
savi
Shewanella avicenniae
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
savi02000
]
JYB87_00700
Transporters [BR:
savi02000
]
Other transporters
Pores ion channels [TC:
1
]
JYB87_00700
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Ortholog
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GFIT
Motif
Pfam:
Plug
TonB_dep_Rec_b-barrel
OMP_b-brl_3
CFAP143
Motif
Other DBs
NCBI-ProteinID:
QSX33808
UniProt:
A0ABX7QSF5
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All DBs
Position
161828..163942
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AA seq
704 aa
AA seq
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MSKLPARISLLALAVGCACQANADEQIVRDRLLNVNEVIVVQGDKPTAVTEATTHWSVTA
DDIKAMGAVSLEDVLETVPGVYVRYGGQGTPRIDIRGFKTRHVTLLINGVPANSADDGQF
DPSLIPTSQIETVEVSMGPASVLYGPGGAGGVINIITKQGQNAPAFAAKVEGSQNSTYNS
EMSLAGSGDNWQGLVSASYQTTDGFPMSSDYVATEYQDRDTRLNADRTIRNFYAQGSYWI
NDDTQLIANAAFRSGDWGQAPRDGSGVSNVRYQGVDDYQGTTVQLGIAHKLNDTLTLRGF
GYHNQTDKVDQTFTDETYAALSAAQDSTSKVQGINLQLIADFAEKGIWSTSAIAEKQSWD
SEDTQYPAVATGGSGSGSGSGGGSGSGSGSGSGGGSGSGGGSGSGGGSGSGSGSGSSAAP
TVTSLSDSAWVYTLATEYQHQLGDNFGYTVGAGFHSMDADNNSDDDYSAMASSYWQALEG
TKLTLGVARKIRFPSMSDLYDLSSGNLDLETETSRHLELGLSQDLGWQSALDIHVFTTDT
DNYIANDSNGVSQNIGDYRFNGYDATITNQSIEGLKLSLAYNYLNSKDRHADETRSDGLN
YRPKHQIRFEAAYQLPTDTKLHLNVQRVIDQVYFQNVRVNGVRTLTEFGLNPYTLVDVKL
SQGFMDDKLEMYIRAANLLDENYYQSDSMPMAGRQVFLGLNWQI
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaattaccagcaagaatctcacttctggcgttagccgtggggtgcgcctgtcaa
gccaatgcagacgagcaaattgtgcgtgatcgtttgctcaacgtaaacgaagtaattgtg
gtgcagggcgataagccaactgcagtgactgaggcaaccactcactggagtgtgactgct
gatgacatcaaagcaatgggtgcggtgagcttagaagatgtattggaaactgtgccgggc
gtttacgtgcgttacggcggtcaaggcactccgcgcatcgatattcgtggctttaaaact
cgccacgttaccctgttaatcaacggtgtacctgccaacagtgctgacgatggtcagttc
gacccaagtttgatcccaaccagccaaattgaaacggttgaagtgtcgatgggcccagcc
tcggtgctgtatggtccaggtggcgcgggtggtgttatcaacatcatcaccaagcaaggg
caaaatgcaccggcatttgccgccaaagtggaaggttcacaaaactcaacctacaacagc
gaaatgagcttggcgggtagcggcgacaactggcaagggctggtcagcgcgagctatcaa
accacagacggtttcccaatgtcttcagattacgtagcgactgaataccaagaccgcgac
acccgcttgaacgctgatcggactattcgtaatttttacgctcagggcagctattggatc
aatgacgacacccaactgattgccaacgcagcgttccgctctggtgattggggccaagct
ccgcgcgatggtagcggtgtgagcaatgtgcgttatcaaggggtagatgactaccaaggt
actacagtgcagttgggtattgcccacaagctgaatgacactctgacgttacgtggtttc
ggttaccacaaccaaaccgataaagtggatcaaacctttaccgatgagacctatgccgca
ctgtctgcggcgcaagacagcacctctaaagtgcagggcattaacctgcagctgattgct
gactttgctgaaaaaggcatctggagcacctcggctattgcagaaaagcaaagctgggat
tctgaagatactcaatatccagcggtagccactggtggttcaggtagcggctctggttca
ggtggtggttctggttcaggtagcggctctggttcgggcggcggctctggctcaggtggt
ggttctggttcgggcggtggttctggttcaggtagcggttctggcagcagcgcagcaccg
accgttacctcattgtcagattcggcttgggtttacaccttagcgaccgaatatcaacat
cagttgggtgataactttggttacaccgtgggggcgggcttccatagtatggatgccgac
aacaactcagatgatgattactccgctatggcttcaagctactggcaagcactggaaggc
actaagctgaccttaggtgtggcgcgtaagattcgtttcccatcaatgtcagatctgtat
gacttgtcatccggtaacttggatctggaaactgaaacatcacggcatctggaactgggt
ttgagtcaagacttgggctggcaaagtgcgttggatatccatgtctttaccacggatacc
gacaactacattgccaacgacagcaacggtgtgtcacaaaacatcggtgattatcgtttt
aatggttatgatgccactatcactaaccaaagcattgaaggtttgaaactgagcttggcg
tataactacctcaactcaaaagaccgtcatgcagatgaaactcgcagcgatgggttaaac
tatcgtccaaaacaccaaatccgttttgaagcggcatatcaactgccaaccgataccaag
ttgcacctgaatgtgcagcgggtgatcgaccaagtgtacttccaaaacgtgcgagtaaac
ggtgtacgtaccctgacagagttcggcttgaatccatacaccttagtggatgtgaagctg
agccaaggcttcatggatgataagttagagatgtatatccgcgctgccaatctgttggat
gaaaattactaccaaagcgactccatgccgatggcaggtcgtcaggtatttttaggactt
aactggcagatttaa
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