Shewanella avicenniae: JYB87_01145
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Entry
JYB87_01145 CDS
T07845
Name
(GenBank) LysR family transcriptional regulator
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
savi
Shewanella avicenniae
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
savi03000
]
JYB87_01145
Transcription factors [BR:
savi03000
]
Prokaryotic type
Helix-turn-helix
LysR family
JYB87_01145
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
MarR
Mga
HTH_5
HTH_24
KH_BICC1
MarR_2
HTH_28
Motif
Other DBs
NCBI-ProteinID:
QSX33891
LinkDB
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Position
262072..262947
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AA seq
291 aa
AA seq
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MSRLNYHHLYYFWQVARQGNLTQTAQRLHISQSALSSQIKQLEQALNVQLFIREGRKLSL
TESGYHALSYAEEIFKNGEELEQLLSSGTTLPSAPIRIGILSTISRNFIEQFIQPLINQN
DCKFSLQSMSQTGLLNAMSELQLDMALTNIPIRSSTLTSWQSRVLARQPVAIIGPPNLDL
TNKFDARYRKQRWVLPYGENPLRSAFDAFAAQYQLQPEIVAESDDMAMLRLLTRDTGALA
VMPEVVVKDELDKGELKSYMLLPNVFEIFYAVTAERRVVHPKLGMLLRPLM
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgacttaactaccatcatctgtattacttctggcaggtggcgcggcagggcaat
ttgacccaaactgcccagcggctgcatatttcccagtcggccttgtcatctcaaatcaaa
cagttagaacaagcgctcaatgtacagctgtttattcgcgaagggcgcaagctgtcattg
accgaaagtggctatcacgcgctcagctacgccgaggagatttttaagaacggtgaagag
ttagagcaactgctaagtagtggcacgaccttgcctagtgcgccaatccgtatcggtata
ctctcgaccatctcgcgtaactttatcgagcagtttattcagccgctgattaaccaaaat
gactgcaaattctcgctgcagtcgatgagtcaaaccggtttgcttaacgccatgtctgaa
ttgcaactggacatggcgctcaccaatattccgatccgcagttccaccttaaccagttgg
caaagccgcgtattagcccggcaaccggtggcgattatcggcccgccaaacttggatctg
accaataaatttgatgcgcgttaccgcaagcagcgctgggtgttgccctatggcgaaaac
ccattacgttcggcgtttgatgcctttgcggcgcagtatcaactacaacctgaaatcgtg
gctgaatcagacgatatggcgatgttgcgtttgttgacccgtgataccggcgcgttagcg
gtaatgccagaggtggtggtcaaagatgaattggataaaggcgaactgaagagttatatg
ctgttgcccaacgtatttgaaatcttctatgcggttaccgcggagcgacgagtggttcac
cccaaattgggcatgttgttgcggccgctgatgtaa
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