Shewanella avicenniae: JYB87_01310
Help
Entry
JYB87_01310 CDS
T07845
Name
(GenBank) aromatic amino acid lyase
KO
K01745
histidine ammonia-lyase [EC:
4.3.1.3
]
Organism
savi
Shewanella avicenniae
Pathway
savi00340
Histidine metabolism
savi01100
Metabolic pathways
Module
savi_M00045
Histidine degradation, histidine => N-formiminoglutamate => glutamate
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09100 Metabolism
09105 Amino acid metabolism
00340 Histidine metabolism
JYB87_01310
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
JYB87_01310
Enzymes [BR:
savi01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.1 Ammonia-lyases
4.3.1.3 histidine ammonia-lyase
JYB87_01310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lyase_aromatic
Motif
Other DBs
NCBI-ProteinID:
QSX33923
LinkDB
All DBs
Position
complement(297454..298998)
Genome browser
AA seq
514 aa
AA seq
DB search
MSRVADPIIVGQQPLTIAQVAAVAAGAQVQLNDAPDYIASIERGAQFIDSLLAEEGVVYG
VTTGYGDSCTVAVNEALVAELPLHLTRFHGCGMGQYLTEQQARAVMVCRLNSLALGKSGV
SYRLLQRLAELLNRNIVPLIPEEGSVGASGDLTPLSYLAAVLQGERQVLFNGEQQDAATV
FQQLDITPLVLRPKEGLALMNGTAVMTALACLAFQRADYLARLCARITALASITLQGNSH
HFDEILFNAKPHPGQMQVAKWIRDDLQHHTHPRNSERLQDRYSIRCAPHIIGVLVDAQPF
MRQFIEIELNSANDNPIVDAEGEHILHGGHFYGGHIAFVMDSLKNAVANLADLLDRQMAL
MMDPKFNHGLPANLSGSEGPRRVINHGFKAVQIGCSAWTAEALKLTMPASVFSRSTECHN
QDKVSMGTIAARDALRVLTLTEQVASAALLAVSQGVRLRVRQQQLSYESLSPALNSLLTQ
LAEQLPLVDEDRPLEQTLRDTLAKIQQAVWEVPQ
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgagccgtgttgctgacccgattattgttggccaacaaccactaaccattgcccaagtg
gcggcggttgccgccggtgcgcaggtgcagctcaatgatgcgcccgactacatcgccagc
attgagcggggcgcccaatttattgatagcctgcttgctgaagagggggtggtctatggt
gttaccaccggctatggcgactcctgcaccgttgcggtgaatgaagccttagtcgcagag
ctgccgctgcatctgacccgctttcatggctgcggtatggggcaatacctaactgagcag
caagcacgcgccgtgatggtgtgccgcttaaattcgctggcattggggaaatctggggtc
agttatcgcttattgcaacgccttgcggaactgcttaatcgcaacatagtgccactcatt
cccgaagagggttcggtgggtgccagtggcgatctcaccccgctgtcttaccttgcagca
gtactgcaaggcgaacgacaagtgctgtttaatggcgaacaacaagatgctgcgaccgtg
tttcagcagttagatatcacaccattagtgctacgcccgaaagagggattagcgctgatg
aacggcactgcggtcatgaccgcactggcctgcttggcctttcaacgggcggattattta
gcgcgcctttgtgcccgcattaccgcgctggcgtcgattacgttgcaaggcaacagccat
cattttgatgaaatcctgtttaatgccaaaccgcatccggggcagatgcaagtggccaaa
tggatccgcgacgacctgcaacaccatacccatccgcgcaacagtgagcgcttgcaggat
cgatattcgattcgctgcgcaccgcacatcatcggggttctggtggatgctcagccgttt
atgcggcagtttattgaaatcgaattaaacagcgccaacgacaatccgattgtcgatgct
gaaggtgagcatattctgcatggcggccatttttacggtggtcatatcgcctttgtgatg
gattcgctgaaaaacgcggtggcgaacttggctgatctattggatcggcagatggcgtta
atgatggaccctaaattcaaccacgggctgccggccaatctatcgggcagcgaagggcct
cgacgagtgattaaccacggctttaaagcggtgcaaatcggttgttctgcatggaccgcc
gaagcgctaaaactgaccatgcccgccagcgtgttctcacgctcaacggaatgccacaac
caagataaagtgagcatgggcaccattgctgcacgggatgcactgcgcgtgctcactctg
accgagcaagtcgccagcgccgctttgttagccgtgagccaaggggtgcgattgcgagta
cggcaacaacagttgagttacgagagtttgagcccggcgcttaacagtctactcacccag
ttagccgaacaactgccgctcgtcgacgaagaccgaccgttagagcagacactgcgtgat
acattggccaaaatccaacaagcggtatgggaggtacctcagtga
DBGET
integrated database retrieval system