Shewanella avicenniae: JYB87_01470
Help
Entry
JYB87_01470 CDS
T07845
Name
(GenBank) DEAD/DEAH box helicase
Organism
savi
Shewanella avicenniae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
SNF2-rel_dom
ResIII
DEAD
SWI2_SNF2
AAA_34
RuvB_N
PTS_IIA
Motif
Other DBs
NCBI-ProteinID:
QSX35378
LinkDB
All DBs
Position
333053..335686
Genome browser
AA seq
877 aa
AA seq
DB search
MLAIDDLYSFGEGVIVQSRSANGITQHLVEFPESNERRWIPYFALRQIKGVKHAYIVGSQ
SEGNVAERLRLKTLAHALRNWNENTGALSSLEFNPLPHQIHLVHRILNSGSLNWLIADDV
GLGKTIETGMLLYALQQRGQAKRILLITPAGLTRQWQEEMYDKFRLGDFQIYGHHFQIHE
PREWKMHDHVIASIDKLKQESHLELLLQADAWDLVVFDEAHRLSRRQYGLHYDTSERFNL
ALSLRKSEKARSILLLTATPHQGMQDKFISLLELLRPDRKNEFALLSLKPVLLHDMVIRN
YKADVTDSEGNFVFHGKSTIALEVPVNQQSIDFDQSLQDYLRKGYQAGKNKGYSGNAIGF
VMTVYRKLAASSVAAIRRALYRRLSRLENDVLDEIIQSNFVEDERFQGELEEFTVSSNQD
NREEFFDGEIELLKLLITRVEQLINHDDKLSRFMDTLLKQLLQDNPNEKILIFSEYRATQ
EYIKEAITAQFGEDKVVLLHGGLSHDERRDVIGQFDNDAQFLISTEAGGEGINLQRHCHI
MVNYDLPWNPMRLVQRIGRLYRYGQQKKVVVLNVNSPGTVDEQIIALMYQRIEQVVSDMA
AVQGDEFNEALKDDILGEVSNLLDLEEILEQASAGGIERTEERIKEALERAKNATNLQRD
LFKYVSRYNPEDLASELVITTAHQLTFIEGMCKQLNIEIVKRIHDDKVLQLKMPEKVMNE
LGTRSSTLDITVDRDMARSRKNTVMMDMNASLMQLFIRTACSFSFGGKTASVCARDLSGN
SFITANLRWQDIYGRRMKQDFAAFFIQGNRVYQNPKVLGDWLLEEAETSSIIPTKDSNEH
WFQLVEREAQKVLNDSTEINVIPDHVDWVSGAWLNNE
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgttagcaattgatgacctctattcgtttggtgaaggggttatcgttcaaagtcggagc
gcaaatggtattactcagcatttggttgaatttccggaaagtaacgagcgacggtggatt
ccctattttgccttgagacaaatcaaaggggtaaaacatgcttatatcgttggttctcaa
tcagaaggtaatgtagctgaacggttacgattgaaaactctggcccatgcgttgcgtaac
tggaatgaaaacactggtgcgctttcaagtttggagtttaacccgttaccacatcagatt
catttagtgcatcgaatcttaaattccgggagtctaaattggctaatcgctgatgatgtt
ggtttagggaaaacgattgaaacaggcatgctgctgtatgcattgcagcagcgaggacaa
gccaaaagaattttgttaattactcctgcaggtctcactcgccagtggcaggaggagatg
tacgataagtttagattgggtgattttcaaatatatggtcatcattttcagattcatgag
cctagagaatggaagatgcacgatcatgtaatagcatccattgataagttgaaacaagag
tctcacctcgaactgctcctacaggcggacgcttgggatctggtggtgtttgatgaggcg
catcggctttctcgtcggcaatatggtctgcactatgatacttctgagcgttttaatttg
gcgcttagcttgagaaaatcggaaaaggctcgttcgatactgttactgacagcaacaccc
catcaggggatgcaggataagtttatctctttacttgagttactaagaccagatagaaag
aatgaatttgctttactttcattaaaaccagtattgcttcatgacatggtgatacggaac
tacaaggctgatgttactgactctgaaggaaattttgtattccatggaaaatcaaccatt
gctttagaagtaccagttaatcagcagtctattgactttgatcagtcactccaagattac
ttacgaaaaggttatcaagcggggaaaaataagggctattcggggaatgccattggcttt
gtaatgactgtgtatcgcaagcttgcagcttcaagtgttgcggctattagaagggcgcta
tatcgccgacttagccgcttagaaaacgatgttttagatgagattattcaatctaatttt
gtcgaagatgaacgttttcaaggtgaattagaagagtttactgtgagctcaaatcaggat
aatcgtgaagagttttttgacggtgagattgaacttctgaaattactgatcaccagagtc
gagcagttaataaatcatgatgacaaactatcgcgcttcatggatacgttgttaaaacag
ctcctccaagacaatcctaacgaaaaaattctaattttctcagaatacagggcaacccaa
gaatatatcaaagaggctatcactgctcagtttggtgaggataaagtcgtgctgttgcac
ggtggtttgtcccatgatgaacgacgagacgttatcgggcagttcgataatgatgcacaa
ttcttaatatcaactgaggctggtggtgaaggtattaacttacagcgacactgccacatc
atggtcaactatgatttgccgtggaatccaatgcggcttgtccaacgaataggtcgtttg
tatcgatacggtcagcagaagaaagtcgttgtgctgaacgtaaattcaccggggactgtg
gatgaacaaattatcgcgttgatgtatcagcgaattgaacaagtcgtcagtgatatggcg
gcagtacaaggtgacgaatttaatgaagctttgaaggacgatattctaggcgaagtctct
aaccttttagatttagaggaaattcttgagcaagcatccgctggtggaattgaacgtact
gaagaaaggattaaagaagcacttgaacgtgcgaaaaacgcgacaaatttacaacgtgac
ctatttaaatacgtttcgcgttataacccagaagatttggcaagtgaattggtaatcact
acagctcaccaactgacctttattgaaggaatgtgtaagcagttaaatattgaaattgtt
aagcggatacatgatgacaaggtccttcaattgaaaatgccagaaaaagtcatgaatgag
ctagggactcggtctagtacactcgatattactgtagatcgcgatatggcaagaagtcgt
aagaatacagtaatgatggatatgaatgcgtcattaatgcagctattcattcgcactgca
tgtagttttagtttcggtggtaagacagcatctgtatgtgctcgagatttaagtggtaac
tcatttattactgcaaatttgagatggcaagatatttatggaagacgaatgaagcaagat
tttgcagccttcttcattcaagggaatcgagtctatcagaatcctaaagttctgggcgat
tggcttttagaagaagctgagaccagcagtataatccctaccaaagatagcaatgagcat
tggtttcaattggttgaacgagaagctcagaaagtacttaacgactcaactgaaatcaat
gtgatacccgatcacgtggactgggtgagcggcgcgtggctgaataatgaatag
DBGET
integrated database retrieval system
