Shewanella avicenniae: JYB87_01655
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Entry
JYB87_01655 CDS
T07845
Symbol
murF
Name
(GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
savi
Shewanella avicenniae
Pathway
savi00300
Lysine biosynthesis
savi00550
Peptidoglycan biosynthesis
savi01100
Metabolic pathways
savi01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
JYB87_01655 (murF)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
JYB87_01655 (murF)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
JYB87_01655 (murF)
Enzymes [BR:
savi01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
JYB87_01655 (murF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
QSX33989
LinkDB
All DBs
Position
372260..373633
Genome browser
AA seq
457 aa
AA seq
DB search
MIALTLAEIAIALGARLLPSLALNIGVNRVTTDSRNADGSLFIALKGERFDGHDYVQDAI
DNGAMAVLVHQEMRVSVPQLVVADTHQALGKLGKLVRDRVAPHCVALTGSNGKTSVKEMV
ASILSRQFSVLYTAGNLNNDIGVPLTALRLKLSHEYAVFELGANHPGEIDYTSDIVRPQV
ALVNNVGSAHLAGFGSEAGVAKAKSEIFNHLSADGTAIINADDRYADLMRQASAGHRQLA
FSSETDADVMATQLTHDAGGHYQFVLNYKYQQLEIKLPLAGRHQVNNALAAASICIALNV
PLDLIKTGLEAMKPVKGRMVPYQFGRVLLVDDSYNANPASVTVAINWLKELSGFRALVLG
DLGELGDNAALLHRELGEQAKQAGLSALYCCGDLTQNTSEGFGSEHQQDIEQLVNKLITD
IKQQTGMVTVLVKGSRSSRMERVVEALIAAQGRGEFV
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgattgcgttaaccctagctgagatcgctatcgccctcggtgcgcggttgttgccttca
ttagcgctcaatataggtgttaaccgcgtcaccaccgacagccgcaatgccgatggcagt
ttatttatcgccttaaaaggcgagcgttttgatggccatgattatgtgcaagacgcaatc
gacaatggtgcgatggcggtgttggtgcaccaagaaatgcgtgtttcagtaccgcaatta
gtggtggccgatactcaccaagcactgggtaagcttggcaaattggtgcgtgaccgcgtg
gcgccgcattgtgtggcattgactggttcaaatggtaaaaccagtgtcaaagagatggtg
gcatcgattttatcacggcaattttcagtgctttacaccgctggcaacctcaataatgac
attggcgtgccgcttaccgcattacggttaaagctttcgcacgaatatgcggtgtttgag
ctgggcgccaatcatcccggtgaaattgattacacctctgacatcgtgcggccacaggtt
gcgttggtcaacaacgtgggcagtgcgcatttagctggctttggttccgaagcgggcgtg
gctaaggccaagtcggaaatatttaaccaccttagcgccgatggtaccgcgatcatcaat
gccgatgaccgctatgccgatttaatgcgccaagcctcagctgggcatcggcaactcgca
ttctcgagcgaaactgacgccgatgtgatggcaacgcagctaacccatgacgccggtggt
cattaccagtttgttctcaactacaaatatcaacagcttgaaattaagttgccattagcg
ggacggcatcaggtcaacaatgccttagccgccgcgtcgatctgtattgcgctgaatgtg
ccgttggatctgatcaaaaccggactggaagcgatgaagccagtgaagggccgcatggtg
ccatatcagttcggtcgggtgttgttggtggatgacagttacaacgccaaccctgcatct
gtgacggtggccataaactggctaaaagaattatcaggatttcgtgccttggtactgggc
gaccttggggaattaggcgacaatgccgcgcttttgcaccgcgaattgggtgagcaggca
aaacaggcaggcttatcggcactttattgttgcggtgacttaacccaaaacaccagtgaa
ggattcggctcagagcatcagcaagatattgagcaactggtgaataaattaataacagat
atcaagcagcaaaccgggatggtgactgtattggtaaaaggttctcgtagttcgcggatg
gagcgagtggttgaggccttgatagccgcccaagggcgcggggagtttgtgtag
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